Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm28222-201ENSMUST00000191210 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28776-201ENSMUST00000191282 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm29306-201ENSMUST00000191366 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm29618-201ENSMUST00000191423 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28136-210ENSMUST00000191432 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm29251-201ENSMUST00000191480 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28658-201ENSMUST00000191532 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm32180-201ENSMUST00000192415 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm30598-201ENSMUST00000192620 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm37627-201ENSMUST00000194585 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm37526-201ENSMUST00000194640 619 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm34274-201ENSMUST00000195825 615 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm3549-201ENSMUST00000203873 794 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm44892-201ENSMUST00000208595 488 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 AC155709.1-201ENSMUST00000218794 162 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 AC164436.1-201ENSMUST00000227074 772 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm9985-201ENSMUST00000044101 510 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 AC165080.3-201ENSMUST00000217162 3116 ntBASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim3Q9R1R2 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm6327-201ENSMUST00000171185 1335 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm26645-201ENSMUST00000181076 1316 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm45657-201ENSMUST00000211318 1349 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Mir760-201ENSMUST00000103257 119 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm11972-201ENSMUST00000118514 389 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm6142-201ENSMUST00000120290 325 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm13237-201ENSMUST00000122151 635 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm43546-201ENSMUST00000196721 943 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm43396-201ENSMUST00000197506 706 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm42713-201ENSMUST00000202709 945 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm45136-201ENSMUST00000205793 943 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm9357-201ENSMUST00000207138 805 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm45070-201ENSMUST00000208100 246 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 AC155270.1-202ENSMUST00000221503 352 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 AC124450.1-201ENSMUST00000225569 495 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms