Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Gm44021-201ENSMUST00000203055 3516 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 AC159002.2-201ENSMUST00000228843 4874 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Gm26575-201ENSMUST00000181714 2232 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Gm23701-201ENSMUST00000103893 110 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Gm17132-201ENSMUST00000109542 1158 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Gm8662-201ENSMUST00000118644 574 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Gm28546-201ENSMUST00000188221 615 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Gm37729-201ENSMUST00000194761 1172 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Mir7116-201ENSMUST00000195956 70 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Gm44566-201ENSMUST00000207638 304 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Gm45497-201ENSMUST00000211701 740 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 AC138284.2-201ENSMUST00000213982 567 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 AC160112.1-201ENSMUST00000219139 714 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 AC132384.13-201ENSMUST00000219556 1159 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 AL590614.1-201ENSMUST00000226037 268 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Gm4953-201ENSMUST00000077309 483 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Gm6807-201ENSMUST00000077435 888 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Gm23423-201ENSMUST00000082782 106 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Gm43961-201ENSMUST00000203289 1872 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Gm42820-201ENSMUST00000200084 3063 ntBASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm14373-201ENSMUST00000122467 2158 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm25276-201ENSMUST00000104300 124 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm6491-201ENSMUST00000118273 990 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm14607-201ENSMUST00000119119 491 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm14485-201ENSMUST00000119489 493 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm14048-201ENSMUST00000121864 1268 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm22024-201ENSMUST00000122733 287 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm15843-201ENSMUST00000146593 529 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm23207-201ENSMUST00000158665 102 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm20797-201ENSMUST00000177894 383 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm25947-201ENSMUST00000180343 110 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm18699-201ENSMUST00000190713 243 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm6123-201ENSMUST00000193658 1069 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm38337-201ENSMUST00000193986 599 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm43590-201ENSMUST00000195987 387 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm7733-201ENSMUST00000199038 919 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm43226-201ENSMUST00000202438 259 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm44243-201ENSMUST00000204323 692 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm44694-201ENSMUST00000205317 1298 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm8077-201ENSMUST00000209221 1024 ntBASIC8.28□□□□□ -1.08
Trim11Q99PQ2 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim11Q99PQ2 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC8.28□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms