Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Cstf3Q99LI7 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.5□□□□□ -1.37
Cstf3Q99LI7 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cstf3Q99LI7 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Cstf3Q99LI7 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cstf3Q99LI7 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
Cstf3Q99LI7 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.5□□□□□ -1.37
Cstf3Q99LI7 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cstf3Q99LI7 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cstf3Q99LI7 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Cstf3Q99LI7 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.5□□□□□ -1.37
Cstf3Q99LI7 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cstf3Q99LI7 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cstf3Q99LI7 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cstf3Q99LI7 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cstf3Q99LI7 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm44286-201ENSMUST00000204098 1487 ntBASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm24519-201ENSMUST00000104507 132 ntBASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm14865-201ENSMUST00000117523 494 ntBASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm13260-201ENSMUST00000117797 1264 ntBASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm13222-201ENSMUST00000119638 138 ntBASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm15842-201ENSMUST00000120513 618 ntBASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm15171-201ENSMUST00000122191 334 ntBASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm8577-201ENSMUST00000122420 986 ntBASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm15242-201ENSMUST00000122459 283 ntBASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm22025-201ENSMUST00000122734 302 ntBASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm16357-201ENSMUST00000144091 474 ntBASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm22730-201ENSMUST00000158085 171 ntBASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm16112-201ENSMUST00000159075 382 ntBASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm21392-201ENSMUST00000182950 972 ntBASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm43160-201ENSMUST00000196453 421 ntBASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 AC132433.1-201ENSMUST00000221553 1101 ntBASIC6.49□□□□□ -1.37
Cstf3Q99LI7 AC161252.2-201ENSMUST00000224978 374 ntBASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 AW822073-201ENSMUST00000075305 555 ntBASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Mir455-201ENSMUST00000093594 82 ntBASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm43029-201ENSMUST00000201829 1535 ntBASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
Cstf3Q99LI7 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Cstf3Q99LI7 AC165080.3-201ENSMUST00000217162 3116 ntBASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Gm11833-201ENSMUST00000118393 853 ntBASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Gm12447-201ENSMUST00000119110 470 ntBASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Gm11338-201ENSMUST00000120086 1160 ntBASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Gm12104-201ENSMUST00000120359 979 ntBASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Cstf3Q99LI7 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Mir1981-201ENSMUST00000157934 82 ntBASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Cstf3Q99LI7 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Mir8114-201ENSMUST00000183582 111 ntBASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Gm27596-201ENSMUST00000185061 83 ntBASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Gm29197-201ENSMUST00000185922 702 ntBASIC6.48□□□□□ -1.37
Cstf3Q99LI7 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Gm37493-201ENSMUST00000193167 433 ntBASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Gm43689-201ENSMUST00000195951 427 ntBASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Gm42804-201ENSMUST00000199701 178 ntBASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Gm43930-201ENSMUST00000203868 845 ntBASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Gm29759-201ENSMUST00000205860 327 ntBASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Gm45122-201ENSMUST00000206376 784 ntBASIC6.48□□□□□ -1.37
Cstf3Q99LI7 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 240.2 ms