Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Gm43189-201ENSMUST00000196040 3069 ntBASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Gm25760-201ENSMUST00000103989 132 ntBASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Gm24173-201ENSMUST00000104130 128 ntBASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Gm13156-201ENSMUST00000118348 321 ntBASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Gm4911-201ENSMUST00000119388 945 ntBASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Gm25550-201ENSMUST00000158079 128 ntBASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Gm37380-201ENSMUST00000193752 397 ntBASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Ighv1-29-201ENSMUST00000194116 342 ntBASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Gm44279-201ENSMUST00000205154 472 ntBASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Gm30646-201ENSMUST00000207662 180 ntBASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Gm45626-201ENSMUST00000210093 361 ntBASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 AC115793.1-201ENSMUST00000216605 215 ntBASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Gm18586-201ENSMUST00000217265 518 ntBASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 AC122533.1-201ENSMUST00000225177 767 ntBASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Mir7b-201ENSMUST00000083557 111 ntBASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Ccdc60Q8C4J0 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 AC121286.2-201ENSMUST00000218069 2470 ntBASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Rnu11-201ENSMUST00000104135 134 ntBASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Gm12375-201ENSMUST00000119331 921 ntBASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Gm13207-201ENSMUST00000119862 773 ntBASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Gm5843-201ENSMUST00000121631 476 ntBASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Gm20637-201ENSMUST00000175715 462 ntBASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Mir6367-201ENSMUST00000183385 102 ntBASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Mir6337-201ENSMUST00000184194 105 ntBASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Gm29240-201ENSMUST00000187248 286 ntBASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Gm45394-201ENSMUST00000209240 1175 ntBASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Gm21731-201ENSMUST00000079524 489 ntBASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 AC156636.2-201ENSMUST00000218845 4557 ntBASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Gm37347-201ENSMUST00000193969 3071 ntBASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Ccdc60Q8C4J0 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc60Q8C4J0 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Ccdc60Q8C4J0 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc60Q8C4J0 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc60Q8C4J0 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc60Q8C4J0 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC8.37□□□□□ -1.07
Ccdc60Q8C4J0 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC8.37□□□□□ -1.07
Ccdc60Q8C4J0 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC8.37□□□□□ -1.07
Ccdc60Q8C4J0 Gm13357-201ENSMUST00000120528 537 ntBASIC8.37□□□□□ -1.07
Ccdc60Q8C4J0 Gm11498-201ENSMUST00000120660 949 ntBASIC8.37□□□□□ -1.07
Ccdc60Q8C4J0 Gm12101-201ENSMUST00000121590 390 ntBASIC8.37□□□□□ -1.07
Ccdc60Q8C4J0 Gm23426-201ENSMUST00000122483 318 ntBASIC8.37□□□□□ -1.07
Ccdc60Q8C4J0 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC8.37□□□□□ -1.07
Ccdc60Q8C4J0 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC8.37□□□□□ -1.07
Ccdc60Q8C4J0 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc60Q8C4J0 Gm25989-201ENSMUST00000158761 133 ntBASIC8.37□□□□□ -1.07
Ccdc60Q8C4J0 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC8.37□□□□□ -1.07
Ccdc60Q8C4J0 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Ccdc60Q8C4J0 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC8.37□□□□□ -1.07
Ccdc60Q8C4J0 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC8.37□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms