Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Gm26162-201ENSMUST00000157793 132 ntBASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Gm22530-201ENSMUST00000158820 118 ntBASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Gm9658-201ENSMUST00000182757 1012 ntBASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Gm37005-201ENSMUST00000193281 1164 ntBASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Gm3800-201ENSMUST00000221086 554 ntBASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Gm18716-201ENSMUST00000204507 1603 ntBASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 CT010470.1-201ENSMUST00000225364 1876 ntBASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ddx55Q6ZPL9 Gm42636-201ENSMUST00000197174 2239 ntBASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Gm4342-201ENSMUST00000118982 367 ntBASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Gm11504-201ENSMUST00000120211 173 ntBASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Gm15300-201ENSMUST00000122324 279 ntBASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Gm16248-201ENSMUST00000124238 243 ntBASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Gm26346-201ENSMUST00000157525 329 ntBASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Gm18660-201ENSMUST00000199542 629 ntBASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Gm6649-201ENSMUST00000199743 1165 ntBASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Gm44809-201ENSMUST00000208305 993 ntBASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Gm46379-201ENSMUST00000222551 265 ntBASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Gm9315-201ENSMUST00000222696 908 ntBASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Gm24695-201ENSMUST00000083877 83 ntBASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Gm11853-201ENSMUST00000119687 1384 ntBASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Gm38697-201ENSMUST00000198061 1746 ntBASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 AC122828.2-201ENSMUST00000222511 2880 ntBASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ddx55Q6ZPL9 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Gm7337-202ENSMUST00000181439 2655 ntBASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 AC116476.1-201ENSMUST00000226274 2318 ntBASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Gm25346-201ENSMUST00000104509 128 ntBASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Gm9005-201ENSMUST00000119908 607 ntBASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Gm14613-201ENSMUST00000122239 752 ntBASIC7.79□□□□□ -1.16
Ddx55Q6ZPL9 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC7.79□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms