Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 CT030124.1-201ENSMUST00000217130 235 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Rfx1P48377 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Rfx1P48377 Gm7986-201ENSMUST00000221336 551 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Rfx1P48377 AC107663.2-201ENSMUST00000225534 1234 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 Gm5087-204ENSMUST00000225820 645 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 CT010505.1-201ENSMUST00000227026 396 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Rfx1P48377 Gm16020-201ENSMUST00000084281 210 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Rfx1P48377 Gm10805-201ENSMUST00000099710 399 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Rfx1P48377 Gm18537-202ENSMUST00000206215 1503 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 AC125095.1-201ENSMUST00000228387 2020 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Rfx1P48377 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Rfx1P48377 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rfx1P48377 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Rfx1P48377 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Rfx1P48377 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rfx1P48377 AC135083.2-201ENSMUST00000228599 1456 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 AC129085.2-201ENSMUST00000223763 2800 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rfx1P48377 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rfx1P48377 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rfx1P48377 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rfx1P48377 CT009734.1-201ENSMUST00000227657 1687 ntBASIC8.56□□□□□ -1.04
Rfx1P48377 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Rfx1P48377 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Rfx1P48377 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Rfx1P48377 Gm37925-201ENSMUST00000195352 4255 ntBASIC8.56□□□□□ -1.04
Rfx1P48377 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Rfx1P48377 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Rfx1P48377 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Rfx1P48377 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Rfx1P48377 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Rfx1P48377 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Rfx1P48377 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rfx1P48377 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Rfx1P48377 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Rfx1P48377 Gm15159-201ENSMUST00000117062 764 ntBASIC8.56□□□□□ -1.04
Rfx1P48377 Gm15481-201ENSMUST00000120264 539 ntBASIC8.56□□□□□ -1.04
Rfx1P48377 Gm14122-201ENSMUST00000122076 973 ntBASIC8.56□□□□□ -1.04
Rfx1P48377 Gm25842-201ENSMUST00000122590 322 ntBASIC8.56□□□□□ -1.04
Rfx1P48377 Gm11739-201ENSMUST00000125269 723 ntTSL 3 BASIC8.56□□□□□ -1.04
Rfx1P48377 Gm14457-201ENSMUST00000148069 1161 ntBASIC8.56□□□□□ -1.04
Rfx1P48377 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Rfx1P48377 Gm20491-201ENSMUST00000173765 1241 ntBASIC8.56□□□□□ -1.04
Rfx1P48377 Six3os1-213ENSMUST00000177487 537 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Rfx1P48377 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC8.56□□□□□ -1.04
Rfx1P48377 Gm29008-201ENSMUST00000189387 298 ntBASIC8.56□□□□□ -1.04
Rfx1P48377 Gm38306-201ENSMUST00000193954 237 ntBASIC8.56□□□□□ -1.04
Rfx1P48377 Gm8925-201ENSMUST00000197212 763 ntBASIC8.56□□□□□ -1.04
Rfx1P48377 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Rfx1P48377 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC8.56□□□□□ -1.04
Rfx1P48377 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Rfx1P48377 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC8.56□□□□□ -1.04
Rfx1P48377 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC8.56□□□□□ -1.04
Rfx1P48377 AC134860.4-201ENSMUST00000223592 978 ntBASIC8.56□□□□□ -1.04
Rfx1P48377 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Rfx1P48377 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Rfx1P48377 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Rfx1P48377 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Rfx1P48377 H2al1j-201ENSMUST00000091180 330 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Rfx1P48377 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC8.56□□□□□ -1.04
Rfx1P48377 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rfx1P48377 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC8.56□□□□□ -1.04
Rfx1P48377 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rfx1P48377 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rfx1P48377 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Rfx1P48377 Gm18726-201ENSMUST00000218175 2010 ntBASIC8.56□□□□□ -1.04
Rfx1P48377 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Rfx1P48377 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rfx1P48377 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Rfx1P48377 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC8.56□□□□□ -1.04
Rfx1P48377 Gm26569-201ENSMUST00000181968 1789 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Rfx1P48377 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Rfx1P48377 Gm44704-201ENSMUST00000208963 1990 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Rfx1P48377 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Rfx1P48377 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rfx1P48377 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rfx1P48377 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rfx1P48377 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rfx1P48377 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rfx1P48377 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Rfx1P48377 AC139941.2-201ENSMUST00000221565 1824 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
Rfx1P48377 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rfx1P48377 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rfx1P48377 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC8.55□□□□□ -1.04
Rfx1P48377 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Rfx1P48377 Gm13195-201ENSMUST00000117229 261 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 Gm13929-201ENSMUST00000117553 1125 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC8.55□□□□□ -1.04
Rfx1P48377 Gm12445-201ENSMUST00000117947 885 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 Gm14795-201ENSMUST00000118461 471 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 Gm15096-201ENSMUST00000121918 878 ntBASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms