Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm28899-201ENSMUST00000191161 615 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm29567-201ENSMUST00000191188 615 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm28222-201ENSMUST00000191210 615 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm28776-201ENSMUST00000191282 615 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm29181-201ENSMUST00000191288 696 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm29306-201ENSMUST00000191366 615 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm29618-201ENSMUST00000191423 615 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm28136-210ENSMUST00000191432 615 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm29251-201ENSMUST00000191480 615 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm28658-201ENSMUST00000191532 615 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm38229-201ENSMUST00000191931 696 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm32180-201ENSMUST00000192415 615 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm30598-201ENSMUST00000192620 615 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm32347-201ENSMUST00000192944 696 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm38121-201ENSMUST00000193213 696 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm38035-201ENSMUST00000194427 696 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm37627-201ENSMUST00000194585 615 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm38350-201ENSMUST00000194789 696 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm37990-201ENSMUST00000195821 696 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm34274-201ENSMUST00000195825 615 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC6.34□□□□□ -1.39
Tnfsf4P43488 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm42558-201ENSMUST00000200982 265 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Tnfsf4P43488 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC6.34□□□□□ -1.39
Tnfsf4P43488 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm8275-201ENSMUST00000219732 424 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Tnfsf4P43488 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Tnfsf4P43488 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.34□□□□□ -1.39
Tnfsf4P43488 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Tnfsf4P43488 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
Tnfsf4P43488 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Tnfsf4P43488 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Tnfsf4P43488 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Tnfsf4P43488 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Tnfsf4P43488 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Tnfsf4P43488 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Tnfsf4P43488 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Tnfsf4P43488 Gm9874-202ENSMUST00000194957 1464 ntBASIC6.34□□□□□ -1.4
Tnfsf4P43488 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.34□□□□□ -1.4
Tnfsf4P43488 AU020206-202ENSMUST00000206358 3009 ntBASIC6.33□□□□□ -1.4
Tnfsf4P43488 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Gm11889-201ENSMUST00000118402 1079 ntBASIC6.33□□□□□ -1.4
Tnfsf4P43488 Gm15149-201ENSMUST00000119370 360 ntBASIC6.33□□□□□ -1.4
Tnfsf4P43488 Gm5387-201ENSMUST00000119776 857 ntBASIC6.33□□□□□ -1.4
Tnfsf4P43488 Gm11653-201ENSMUST00000119992 1009 ntBASIC6.33□□□□□ -1.4
Tnfsf4P43488 Gm14900-201ENSMUST00000120304 733 ntBASIC6.33□□□□□ -1.4
Tnfsf4P43488 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Gm22820-201ENSMUST00000157205 329 ntBASIC6.33□□□□□ -1.4
Tnfsf4P43488 Gm25057-201ENSMUST00000157366 88 ntBASIC6.33□□□□□ -1.4
Tnfsf4P43488 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Gm5300-201ENSMUST00000182201 1003 ntBASIC6.33□□□□□ -1.4
Tnfsf4P43488 Mir6940-201ENSMUST00000183447 70 ntBASIC6.33□□□□□ -1.4
Tnfsf4P43488 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Gm5244-202ENSMUST00000189517 743 ntBASIC6.33□□□□□ -1.4
Tnfsf4P43488 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Gm2287-201ENSMUST00000197417 1084 ntBASIC6.33□□□□□ -1.4
Tnfsf4P43488 Gm4525-201ENSMUST00000198831 254 ntBASIC6.33□□□□□ -1.4
Tnfsf4P43488 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Gm44979-201ENSMUST00000206218 287 ntBASIC6.33□□□□□ -1.4
Tnfsf4P43488 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.33□□□□□ -1.4
Tnfsf4P43488 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Tnfsf4P43488 AC116502.1-201ENSMUST00000220989 291 ntBASIC6.33□□□□□ -1.4
Tnfsf4P43488 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Tnfsf4P43488 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC6.33□□□□□ -1.4
Tnfsf4P43488 AC124450.1-201ENSMUST00000225569 495 ntBASIC6.33□□□□□ -1.4
Tnfsf4P43488 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Gm21731-201ENSMUST00000079524 489 ntBASIC6.33□□□□□ -1.4
Tnfsf4P43488 Gm25189-201ENSMUST00000083911 164 ntBASIC6.33□□□□□ -1.4
Tnfsf4P43488 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Tnfsf4P43488 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Tnfsf4P43488 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Tnfsf4P43488 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Tnfsf4P43488 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Tnfsf4P43488 Gm7690-201ENSMUST00000190885 1399 ntBASIC6.32□□□□□ -1.4
Tnfsf4P43488 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Tnfsf4P43488 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms