Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm43363-201ENSMUST00000201590 2647 ntBASIC7.88□□□□□ -1.15
Traf1P39428 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Traf1P39428 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Traf1P39428 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Traf1P39428 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
Traf1P39428 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Traf1P39428 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Traf1P39428 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Traf1P39428 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Traf1P39428 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Traf1P39428 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Traf1P39428 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC7.88□□□□□ -1.15
Traf1P39428 Gm37262-201ENSMUST00000192816 1818 ntBASIC7.88□□□□□ -1.15
Traf1P39428 Gm20768-201ENSMUST00000199527 2338 ntBASIC7.88□□□□□ -1.15
Traf1P39428 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC7.88□□□□□ -1.15
Traf1P39428 Gm23768-201ENSMUST00000104440 131 ntBASIC7.88□□□□□ -1.15
Traf1P39428 Gm14893-201ENSMUST00000117904 282 ntBASIC7.88□□□□□ -1.15
Traf1P39428 Gm13462-201ENSMUST00000121472 961 ntBASIC7.88□□□□□ -1.15
Traf1P39428 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC7.88□□□□□ -1.15
Traf1P39428 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Traf1P39428 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Traf1P39428 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Traf1P39428 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Traf1P39428 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC7.88□□□□□ -1.15
Traf1P39428 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Traf1P39428 Gm36935-201ENSMUST00000192526 292 ntBASIC7.88□□□□□ -1.15
Traf1P39428 Gm42708-201ENSMUST00000196332 905 ntBASIC7.88□□□□□ -1.15
Traf1P39428 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC7.88□□□□□ -1.15
Traf1P39428 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC7.88□□□□□ -1.15
Traf1P39428 Gm21461-201ENSMUST00000200382 863 ntBASIC7.88□□□□□ -1.15
Traf1P39428 Gm45626-201ENSMUST00000210093 361 ntBASIC7.88□□□□□ -1.15
Traf1P39428 Gm2774-201ENSMUST00000213650 1165 ntBASIC7.88□□□□□ -1.15
Traf1P39428 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC7.88□□□□□ -1.15
Traf1P39428 Gm4042-201ENSMUST00000216946 637 ntBASIC7.88□□□□□ -1.15
Traf1P39428 AC122533.1-201ENSMUST00000225177 767 ntBASIC7.88□□□□□ -1.15
Traf1P39428 AC156790.1-201ENSMUST00000226572 559 ntBASIC7.88□□□□□ -1.15
Traf1P39428 AC123665.3-201ENSMUST00000228735 1216 ntBASIC7.88□□□□□ -1.15
Traf1P39428 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Traf1P39428 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Traf1P39428 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Traf1P39428 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Traf1P39428 Gm38120-201ENSMUST00000195506 4642 ntBASIC7.88□□□□□ -1.15
Traf1P39428 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC7.88□□□□□ -1.15
Traf1P39428 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Traf1P39428 Gm46199-201ENSMUST00000220373 1693 ntBASIC7.88□□□□□ -1.15
Traf1P39428 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Traf1P39428 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Traf1P39428 Gm44121-201ENSMUST00000205169 2006 ntBASIC7.88□□□□□ -1.15
Traf1P39428 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Traf1P39428 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Traf1P39428 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC7.87□□□□□ -1.15
Traf1P39428 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC7.87□□□□□ -1.15
Traf1P39428 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
Traf1P39428 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Traf1P39428 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Traf1P39428 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Traf1P39428 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Traf1P39428 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC7.87□□□□□ -1.15
Traf1P39428 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Traf1P39428 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC7.87□□□□□ -1.15
Traf1P39428 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Traf1P39428 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Traf1P39428 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Traf1P39428 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Traf1P39428 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Traf1P39428 AC132465.1-201ENSMUST00000219938 1307 ntBASIC7.87□□□□□ -1.15
Traf1P39428 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Traf1P39428 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Traf1P39428 Gm45073-201ENSMUST00000207688 4247 ntBASIC7.87□□□□□ -1.15
Traf1P39428 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Traf1P39428 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Traf1P39428 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC7.87□□□□□ -1.15
Traf1P39428 Gm12135-201ENSMUST00000119170 466 ntBASIC7.87□□□□□ -1.15
Traf1P39428 Gm11553-201ENSMUST00000120682 240 ntBASIC7.87□□□□□ -1.15
Traf1P39428 Gm8089-201ENSMUST00000122463 968 ntBASIC7.87□□□□□ -1.15
Traf1P39428 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC7.87□□□□□ -1.15
Traf1P39428 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Traf1P39428 Gm23740-201ENSMUST00000157385 100 ntBASIC7.87□□□□□ -1.15
Traf1P39428 Gm25574-201ENSMUST00000175245 249 ntBASIC7.87□□□□□ -1.15
Traf1P39428 Gm23617-201ENSMUST00000175410 95 ntBASIC7.87□□□□□ -1.15
Traf1P39428 Gm18849-201ENSMUST00000189861 560 ntBASIC7.87□□□□□ -1.15
Traf1P39428 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC7.87□□□□□ -1.15
Traf1P39428 Ighv1-83-201ENSMUST00000199643 351 ntBASIC7.87□□□□□ -1.15
Traf1P39428 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC7.87□□□□□ -1.15
Traf1P39428 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Traf1P39428 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Traf1P39428 Gm5119-201ENSMUST00000215858 634 ntBASIC7.87□□□□□ -1.15
Traf1P39428 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Traf1P39428 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC7.87□□□□□ -1.15
Traf1P39428 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC7.87□□□□□ -1.15
Traf1P39428 CT030184.2-201ENSMUST00000223064 263 ntBASIC7.87□□□□□ -1.15
Traf1P39428 AC132260.1-201ENSMUST00000225499 734 ntBASIC7.87□□□□□ -1.15
Traf1P39428 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Traf1P39428 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Traf1P39428 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC7.87□□□□□ -1.15
Traf1P39428 Gm29486-201ENSMUST00000088648 372 ntBASIC7.87□□□□□ -1.15
Traf1P39428 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC7.87□□□□□ -1.15
Traf1P39428 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC7.87□□□□□ -1.15
Traf1P39428 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Traf1P39428 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms