Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm26528-201ENSMUST00000181965 283 ntBASIC5.35□□□□□ -1.55
Hmgb3O54879 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Hmgb3O54879 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC5.35□□□□□ -1.55
Hmgb3O54879 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Hmgb3O54879 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Hmgb3O54879 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC5.35□□□□□ -1.55
Hmgb3O54879 Gm45122-201ENSMUST00000206376 784 ntBASIC5.35□□□□□ -1.55
Hmgb3O54879 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC5.35□□□□□ -1.55
Hmgb3O54879 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC5.35□□□□□ -1.55
Hmgb3O54879 Gm9685-201ENSMUST00000211275 538 ntBASIC5.35□□□□□ -1.55
Hmgb3O54879 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC5.35□□□□□ -1.55
Hmgb3O54879 AC153943.1-201ENSMUST00000219312 256 ntBASIC5.35□□□□□ -1.55
Hmgb3O54879 AC159267.1-201ENSMUST00000226702 678 ntBASIC5.35□□□□□ -1.55
Hmgb3O54879 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Hmgb3O54879 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmgb3O54879 Ms4a10-201ENSMUST00000072748 1011 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmgb3O54879 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC5.35□□□□□ -1.55
Hmgb3O54879 Gm28392-201ENSMUST00000077630 393 ntBASIC5.35□□□□□ -1.55
Hmgb3O54879 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Hmgb3O54879 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmgb3O54879 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.35□□□□□ -1.55
Hmgb3O54879 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Hmgb3O54879 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Hmgb3O54879 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
Hmgb3O54879 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmgb3O54879 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmgb3O54879 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Hmgb3O54879 Gm11242-201ENSMUST00000120103 2457 ntBASIC5.35□□□□□ -1.55
Hmgb3O54879 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Hmgb3O54879 Gm37023-201ENSMUST00000192895 2426 ntBASIC5.35□□□□□ -1.55
Hmgb3O54879 AC161247.1-201ENSMUST00000217744 2295 ntBASIC5.35□□□□□ -1.55
Hmgb3O54879 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Hmgb3O54879 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmgb3O54879 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
Hmgb3O54879 AC122769.1-201ENSMUST00000226930 1714 ntBASIC5.34□□□□□ -1.55
Hmgb3O54879 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC5.34□□□□□ -1.55
Hmgb3O54879 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Hmgb3O54879 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Hmgb3O54879 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Hmgb3O54879 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Hmgb3O54879 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmgb3O54879 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmgb3O54879 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm24373-201ENSMUST00000104393 132 ntBASIC5.34□□□□□ -1.55
Hmgb3O54879 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC5.34□□□□□ -1.55
Hmgb3O54879 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm22152-201ENSMUST00000116966 125 ntBASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm13469-201ENSMUST00000118231 350 ntBASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm14645-201ENSMUST00000118597 417 ntBASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm12297-201ENSMUST00000121380 979 ntBASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm15362-201ENSMUST00000121459 388 ntBASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm5270-201ENSMUST00000121506 1002 ntBASIC5.34□□□□□ -1.55
Hmgb3O54879 Lrrc8dos-201ENSMUST00000135958 586 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm23392-201ENSMUST00000157580 113 ntBASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm22206-201ENSMUST00000158612 116 ntBASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC5.34□□□□□ -1.55
Hmgb3O54879 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm28142-201ENSMUST00000186899 698 ntBASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm29470-201ENSMUST00000188007 696 ntBASIC5.34□□□□□ -1.55
Hmgb3O54879 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmgb3O54879 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Hmgb3O54879 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm37017-201ENSMUST00000195266 747 ntBASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm44722-201ENSMUST00000206473 436 ntBASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm7419-201ENSMUST00000209962 925 ntBASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm2774-201ENSMUST00000213650 1165 ntBASIC5.34□□□□□ -1.55
Hmgb3O54879 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Hmgb3O54879 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm7392-201ENSMUST00000217815 345 ntBASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC5.34□□□□□ -1.55
Hmgb3O54879 CT025630.2-201ENSMUST00000228293 487 ntBASIC5.34□□□□□ -1.55
Hmgb3O54879 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmgb3O54879 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmgb3O54879 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm5341-201ENSMUST00000058881 489 ntBASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm20900-201ENSMUST00000078729 472 ntBASIC5.34□□□□□ -1.55
Hmgb3O54879 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Hmgb3O54879 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmgb3O54879 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmgb3O54879 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Hmgb3O54879 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Hmgb3O54879 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmgb3O54879 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Hmgb3O54879 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
Hmgb3O54879 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Hmgb3O54879 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.56
Hmgb3O54879 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Hmgb3O54879 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.34□□□□□ -1.56
Hmgb3O54879 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hmgb3O54879 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hmgb3O54879 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 118.3 ms