Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm23979-201ENSMUST00000104071 128 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm12842-201ENSMUST00000117298 476 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm14893-201ENSMUST00000117904 282 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm13462-201ENSMUST00000121472 961 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm15164-201ENSMUST00000122203 271 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm13669-201ENSMUST00000122366 457 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm25435-201ENSMUST00000158277 267 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm21614-201ENSMUST00000183260 1005 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm28413-201ENSMUST00000189369 291 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 AC122844.1-201ENSMUST00000195971 107 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm45693-201ENSMUST00000211391 1157 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm46203-201ENSMUST00000218130 478 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm9231-201ENSMUST00000220817 1009 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm18620-201ENSMUST00000222295 324 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm9315-201ENSMUST00000222696 908 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 AC156790.1-201ENSMUST00000226572 559 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Gm38244-201ENSMUST00000191737 2586 ntBASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Gm13357-201ENSMUST00000120528 537 ntBASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Gm19088-201ENSMUST00000198800 566 ntBASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Gm44111-201ENSMUST00000204649 399 ntBASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 AC124601.1-201ENSMUST00000220531 135 ntBASIC6.73□□□□□ -1.33
Srp54bE9PXC0 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Zfp865-202ENSMUST00000076791 1129 ntBASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Gm12919-201ENSMUST00000119855 1594 ntBASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC6.73□□□□□ -1.33
Srp54bE9PXC0 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms