Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 AC117608.1-201ENSMUST00000225500 3418 ntBASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Gm7961-201ENSMUST00000201338 1436 ntBASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 AC139941.2-201ENSMUST00000221565 1824 ntBASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Gm20768-201ENSMUST00000199527 2338 ntBASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Gm43612-201ENSMUST00000196087 3207 ntBASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 n-R5s178-201ENSMUST00000104249 114 ntBASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Gm11902-201ENSMUST00000118849 270 ntBASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 BC064078-201ENSMUST00000122939 570 ntBASIC5.61□□□□□ -1.51
Usf3B2RUQ2 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC5.61□□□□□ -1.51
Usf3B2RUQ2 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Gm27998-201ENSMUST00000184902 361 ntBASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Gm37517-201ENSMUST00000194004 1289 ntBASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 AC131029.2-201ENSMUST00000226696 628 ntBASIC5.61□□□□□ -1.51
Usf3B2RUQ2 AC164436.1-201ENSMUST00000227074 772 ntBASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Gm24032-201ENSMUST00000083932 159 ntBASIC5.61□□□□□ -1.51
Usf3B2RUQ2 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC5.61□□□□□ -1.51
Usf3B2RUQ2 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm15950-201ENSMUST00000162902 1973 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm27186-201ENSMUST00000184223 307 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm5711-201ENSMUST00000197896 421 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm45279-201ENSMUST00000210315 391 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 AC161374.1-201ENSMUST00000224191 794 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 n-R5s97-201ENSMUST00000082585 113 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 n-R5s95-201ENSMUST00000082684 118 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm6990-201ENSMUST00000086830 348 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms