Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Gm33167-201ENSMUST00000201933 2643 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 AC111010.1-203ENSMUST00000227287 1548 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Gm24434-201ENSMUST00000104081 132 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Gm24473-201ENSMUST00000104483 131 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Snora35-201ENSMUST00000104579 128 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Gm11443-201ENSMUST00000118790 479 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Gm12710-201ENSMUST00000119011 216 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Gm12135-201ENSMUST00000119170 466 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Gm16511-201ENSMUST00000120019 564 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Gm22529-201ENSMUST00000158817 123 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Gm17366-201ENSMUST00000167629 187 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Gm21392-201ENSMUST00000182950 972 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Gm29519-201ENSMUST00000186994 398 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Gm37135-201ENSMUST00000192652 534 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Gm7554-201ENSMUST00000202282 574 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Gm5154-201ENSMUST00000203971 399 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Gm45514-201ENSMUST00000211531 689 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Gm9118-201ENSMUST00000219246 754 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Gm18409-202ENSMUST00000220105 529 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 AC122290.1-201ENSMUST00000225631 1078 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Gm16020-201ENSMUST00000084281 210 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Gm37755-201ENSMUST00000195880 2179 ntBASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Crlf1Q9JM58 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Gm21043-201ENSMUST00000199316 1517 ntBASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Gm43254-201ENSMUST00000199187 2491 ntBASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Crlf1Q9JM58 AC159002.2-201ENSMUST00000228843 4874 ntBASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Gm11590-201ENSMUST00000118999 1455 ntBASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Mir760-201ENSMUST00000103257 119 ntBASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Gm15616-201ENSMUST00000118662 375 ntBASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Gm12242-201ENSMUST00000118824 738 ntBASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Gm12402-201ENSMUST00000120536 334 ntBASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Snora47-201ENSMUST00000157483 138 ntBASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Gm25550-201ENSMUST00000158079 128 ntBASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Gm6918-201ENSMUST00000167622 1222 ntBASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Gm35323-201ENSMUST00000191836 499 ntBASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Gm37430-201ENSMUST00000193039 196 ntBASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Gm43392-201ENSMUST00000196560 434 ntBASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.54□□□□□ -1.52
Crlf1Q9JM58 Gm34149-201ENSMUST00000203547 304 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms