Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm22206-201ENSMUST00000158612 116 ntBASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm9286-201ENSMUST00000173586 508 ntBASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Mir5100-201ENSMUST00000174993 64 ntBASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm24824-201ENSMUST00000175097 78 ntBASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm5252-201ENSMUST00000189030 909 ntBASIC9.09□□□□□ -0.95
Ube3bQ9ES34 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm4785-201ENSMUST00000191025 751 ntBASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm8891-201ENSMUST00000198546 832 ntBASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC9.09□□□□□ -0.95
Ube3bQ9ES34 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm18410-201ENSMUST00000207199 577 ntBASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm2961-201ENSMUST00000211074 772 ntBASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 CT030260.1-201ENSMUST00000223243 442 ntBASIC9.09□□□□□ -0.95
Ube3bQ9ES34 AC154573.2-201ENSMUST00000224174 378 ntBASIC9.09□□□□□ -0.95
Ube3bQ9ES34 AC122034.1-201ENSMUST00000227641 595 ntBASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 CT010505.3-201ENSMUST00000227835 1651 ntBASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 AC132412.1-201ENSMUST00000204155 2724 ntBASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ube3bQ9ES34 Gm42755-201ENSMUST00000198533 1493 ntBASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 C87436-202ENSMUST00000113698 2922 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 AC166574.1-201ENSMUST00000226916 1309 ntBASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Gm13414-201ENSMUST00000117516 727 ntBASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Gm15110-201ENSMUST00000117545 881 ntBASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Gm15209-201ENSMUST00000117703 400 ntBASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Gm13224-201ENSMUST00000119586 94 ntBASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Mup-ps16-201ENSMUST00000120085 596 ntBASIC9.08□□□□□ -0.96
Ube3bQ9ES34 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Gm24782-201ENSMUST00000157641 132 ntBASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Gm26371-201ENSMUST00000157829 104 ntBASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Mir8114-201ENSMUST00000183582 111 ntBASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Gm18407-201ENSMUST00000192126 790 ntBASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Gm44356-201ENSMUST00000196731 111 ntBASIC9.08□□□□□ -0.96
Ube3bQ9ES34 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Gm4972-201ENSMUST00000211108 1254 ntBASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Gm45900-201ENSMUST00000211879 409 ntBASIC9.08□□□□□ -0.96
Ube3bQ9ES34 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 AC154382.1-201ENSMUST00000220958 1282 ntBASIC9.08□□□□□ -0.96
Ube3bQ9ES34 CT954323.2-201ENSMUST00000222056 213 ntBASIC9.08□□□□□ -0.96
Ube3bQ9ES34 AC159205.2-201ENSMUST00000223759 816 ntBASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Olfr654-201ENSMUST00000098173 1155 ntBASIC9.08□□□□□ -0.96
Ube3bQ9ES34 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Gm21043-201ENSMUST00000199316 1517 ntBASIC9.08□□□□□ -0.96
Ube3bQ9ES34 Gm13081-201ENSMUST00000121527 5599 ntBASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms