Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Gm43664-201ENSMUST00000196038 734 ntBASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 AC124489.1-201ENSMUST00000225852 526 ntBASIC6.51□□□□□ -1.37
Lima1Q9ERG0 AC131710.2-201ENSMUST00000226773 683 ntBASIC6.51□□□□□ -1.37
Lima1Q9ERG0 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Gm6166-201ENSMUST00000098689 409 ntBASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Lima1Q9ERG0 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm25311-201ENSMUST00000104136 132 ntBASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm26419-201ENSMUST00000104272 133 ntBASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm13744-201ENSMUST00000118953 850 ntBASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm13237-201ENSMUST00000122151 635 ntBASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm25962-201ENSMUST00000157173 168 ntBASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Mir1929-201ENSMUST00000158635 93 ntBASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm3760-201ENSMUST00000167475 804 ntBASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm27014-201ENSMUST00000182658 937 ntBASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Mir8120-201ENSMUST00000185035 139 ntBASIC6.5□□□□□ -1.37
Lima1Q9ERG0 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm2860-201ENSMUST00000199226 707 ntBASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 AC108947.1-201ENSMUST00000224274 1000 ntBASIC6.5□□□□□ -1.37
Lima1Q9ERG0 AC133598.2-201ENSMUST00000224302 624 ntBASIC6.5□□□□□ -1.37
Lima1Q9ERG0 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm28392-201ENSMUST00000077630 393 ntBASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.5□□□□□ -1.37
Lima1Q9ERG0 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Lima1Q9ERG0 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Lima1Q9ERG0 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Lima1Q9ERG0 AC154597.1-201ENSMUST00000224095 2713 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 210.8 ms