Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Gm12653-201ENSMUST00000117778 561 ntBASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Gm13183-201ENSMUST00000118615 789 ntBASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Gm28064-201ENSMUST00000185639 858 ntBASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Gm7019-201ENSMUST00000194122 369 ntBASIC6.28□□□□□ -1.4
Cdc40Q9DC48 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Gm4042-201ENSMUST00000216946 637 ntBASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Gm5080-201ENSMUST00000220341 743 ntBASIC6.28□□□□□ -1.4
Cdc40Q9DC48 AC079644.2-201ENSMUST00000220581 322 ntBASIC6.28□□□□□ -1.4
Cdc40Q9DC48 AC160114.2-201ENSMUST00000223021 300 ntBASIC6.28□□□□□ -1.4
Cdc40Q9DC48 CT009711.2-201ENSMUST00000225352 934 ntBASIC6.28□□□□□ -1.4
Cdc40Q9DC48 AC114008.1-201ENSMUST00000226193 937 ntBASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Mir106b-201ENSMUST00000083580 82 ntBASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Gm28667-201ENSMUST00000189873 2171 ntBASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Gm5454-201ENSMUST00000052030 1453 ntBASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
Cdc40Q9DC48 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm19024-201ENSMUST00000194681 1319 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Amy2b-201ENSMUST00000120184 1577 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 AC159196.3-201ENSMUST00000224307 1841 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 AC126549.1-201ENSMUST00000225044 3687 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm43707-201ENSMUST00000196451 3187 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm6654-201ENSMUST00000118950 348 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm11581-201ENSMUST00000122024 763 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm7613-201ENSMUST00000139070 487 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm22223-201ENSMUST00000157360 125 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm4202-201ENSMUST00000169025 733 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm3344-201ENSMUST00000169610 603 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm24812-201ENSMUST00000175315 284 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm10136-201ENSMUST00000183196 435 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm27804-201ENSMUST00000185135 119 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28739-201ENSMUST00000185415 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28219-201ENSMUST00000185452 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28542-201ENSMUST00000185545 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm28303-201ENSMUST00000185642 747 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm29244-201ENSMUST00000185825 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm29437-201ENSMUST00000185865 696 ntBASIC6.27□□□□□ -1.41
Cdc40Q9DC48 Gm29412-201ENSMUST00000185869 696 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 134.2 ms