Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm19124-201ENSMUST00000191041 832 ntBASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Gm17935-201ENSMUST00000196649 772 ntBASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Gm43967-201ENSMUST00000203787 301 ntBASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Gm44865-201ENSMUST00000207240 531 ntBASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 AC124778.1-201ENSMUST00000216013 162 ntBASIC8.31□□□□□ -1.08
Trim11Q99PQ2 CT009546.3-201ENSMUST00000220914 208 ntBASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Gm5374-202ENSMUST00000222910 314 ntBASIC8.31□□□□□ -1.08
Trim11Q99PQ2 AC154738.1-201ENSMUST00000227054 368 ntBASIC8.31□□□□□ -1.08
Trim11Q99PQ2 AC154738.2-201ENSMUST00000227403 1110 ntBASIC8.31□□□□□ -1.08
Trim11Q99PQ2 AC131586.4-201ENSMUST00000228424 668 ntBASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 AC166574.5-201ENSMUST00000227438 1432 ntBASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Gm23529-201ENSMUST00000104562 132 ntBASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Gm16458-201ENSMUST00000121428 502 ntBASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Gm14587-201ENSMUST00000121714 658 ntBASIC8.3□□□□□ -1.08
Trim11Q99PQ2 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Gm22600-201ENSMUST00000157598 269 ntBASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Gm23317-201ENSMUST00000157999 129 ntBASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Gm20111-201ENSMUST00000184830 319 ntBASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Gm5334-201ENSMUST00000187472 720 ntBASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Gm17952-201ENSMUST00000193914 747 ntBASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Gm43390-201ENSMUST00000196614 421 ntBASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Gm9038-201ENSMUST00000203400 604 ntBASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Gm5154-201ENSMUST00000203971 399 ntBASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Gm7392-201ENSMUST00000217815 345 ntBASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Gm5791-201ENSMUST00000220840 489 ntBASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Gm9289-201ENSMUST00000221269 606 ntBASIC8.3□□□□□ -1.08
Trim11Q99PQ2 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 AC159205.2-201ENSMUST00000223759 816 ntBASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 AC121997.2-202ENSMUST00000227158 939 ntBASIC8.3□□□□□ -1.08
Trim11Q99PQ2 AC158954.1-201ENSMUST00000228272 1006 ntBASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Gm22977-201ENSMUST00000082615 107 ntBASIC8.3□□□□□ -1.08
Trim11Q99PQ2 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Gm42568-201ENSMUST00000195639 1841 ntBASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim11Q99PQ2 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC8.29□□□□□ -1.08
Trim11Q99PQ2 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 115.7 ms