Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm37138-201ENSMUST00000194564 2089 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Clrn1Q8K445 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gm6545-201ENSMUST00000217186 1786 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Clrn1Q8K445 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gm25546-201ENSMUST00000103977 132 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
Clrn1Q8K445 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gm13006-201ENSMUST00000118683 214 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gm15971-201ENSMUST00000119372 211 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gm15057-201ENSMUST00000121516 534 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC6.65□□□□□ -1.34
Clrn1Q8K445 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gm23229-201ENSMUST00000157297 105 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gm24854-201ENSMUST00000158025 98 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gm16456-201ENSMUST00000174431 920 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gm23139-201ENSMUST00000179454 132 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gm26528-201ENSMUST00000181965 283 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gm27972-201ENSMUST00000184720 137 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gm37328-201ENSMUST00000193191 640 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gm43656-201ENSMUST00000197882 434 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC6.65□□□□□ -1.34
Clrn1Q8K445 AC151901.1-201ENSMUST00000218274 180 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gm46436-201ENSMUST00000221851 1294 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 AC124356.2-201ENSMUST00000221874 336 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC6.65□□□□□ -1.34
Clrn1Q8K445 AC130547.1-201ENSMUST00000228079 1047 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 AC130219.2-201ENSMUST00000228765 807 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Clrn1Q8K445 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Clrn1Q8K445 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Clrn1Q8K445 n-R5s29-201ENSMUST00000082836 119 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Clrn1Q8K445 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Clrn1Q8K445 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.65□□□□□ -1.34
Clrn1Q8K445 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Clrn1Q8K445 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Clrn1Q8K445 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Clrn1Q8K445 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Clrn1Q8K445 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Clrn1Q8K445 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Clrn1Q8K445 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Clrn1Q8K445 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Clrn1Q8K445 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Clrn1Q8K445 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Clrn1Q8K445 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC6.65□□□□□ -1.35
Clrn1Q8K445 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.65□□□□□ -1.35
Clrn1Q8K445 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Clrn1Q8K445 AC111010.1-203ENSMUST00000227287 1548 ntBASIC6.65□□□□□ -1.35
Clrn1Q8K445 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Clrn1Q8K445 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Clrn1Q8K445 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Clrn1Q8K445 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Clrn1Q8K445 Gm19801-201ENSMUST00000218231 1882 ntBASIC6.64□□□□□ -1.35
Clrn1Q8K445 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Clrn1Q8K445 Gm44669-201ENSMUST00000207774 1969 ntBASIC6.64□□□□□ -1.35
Clrn1Q8K445 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Clrn1Q8K445 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Clrn1Q8K445 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Clrn1Q8K445 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Clrn1Q8K445 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Clrn1Q8K445 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Clrn1Q8K445 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Clrn1Q8K445 Gm25757-201ENSMUST00000103986 123 ntBASIC6.64□□□□□ -1.35
Clrn1Q8K445 Gm23437-201ENSMUST00000104036 127 ntBASIC6.64□□□□□ -1.35
Clrn1Q8K445 Mup-ps14-201ENSMUST00000118437 532 ntBASIC6.64□□□□□ -1.35
Clrn1Q8K445 Gm14727-201ENSMUST00000118526 525 ntBASIC6.64□□□□□ -1.35
Clrn1Q8K445 Gm8421-201ENSMUST00000119439 305 ntBASIC6.64□□□□□ -1.35
Clrn1Q8K445 Mup-ps10-201ENSMUST00000119626 556 ntBASIC6.64□□□□□ -1.35
Clrn1Q8K445 Gm14721-201ENSMUST00000121381 525 ntBASIC6.64□□□□□ -1.35
Clrn1Q8K445 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Clrn1Q8K445 Gm26357-201ENSMUST00000158218 115 ntBASIC6.64□□□□□ -1.35
Clrn1Q8K445 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC6.64□□□□□ -1.35
Clrn1Q8K445 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Clrn1Q8K445 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Clrn1Q8K445 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC6.64□□□□□ -1.35
Clrn1Q8K445 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Clrn1Q8K445 Gm27684-201ENSMUST00000183778 80 ntBASIC6.64□□□□□ -1.35
Clrn1Q8K445 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC6.64□□□□□ -1.35
Clrn1Q8K445 Gm29369-201ENSMUST00000190674 615 ntBASIC6.64□□□□□ -1.35
Clrn1Q8K445 Gm37866-201ENSMUST00000191950 696 ntBASIC6.64□□□□□ -1.35
Clrn1Q8K445 Gm37934-201ENSMUST00000192902 402 ntBASIC6.64□□□□□ -1.35
Clrn1Q8K445 Gm37987-201ENSMUST00000194999 825 ntBASIC6.64□□□□□ -1.35
Clrn1Q8K445 Gm17833-201ENSMUST00000197629 1065 ntBASIC6.64□□□□□ -1.35
Clrn1Q8K445 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC6.64□□□□□ -1.35
Clrn1Q8K445 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms