Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Gm43335-201ENSMUST00000198299 3276 ntBASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gm38178-201ENSMUST00000194502 2471 ntBASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gm37216-201ENSMUST00000193817 3478 ntBASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gm16204-201ENSMUST00000117864 1897 ntBASIC8.07□□□□□ -1.12
Brf1Q8CFK2 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gm25344-201ENSMUST00000104503 132 ntBASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gm12135-201ENSMUST00000119170 466 ntBASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gm14938-201ENSMUST00000119482 943 ntBASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gm15061-201ENSMUST00000121076 1046 ntBASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gm22990-201ENSMUST00000175427 89 ntBASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Mir5617-201ENSMUST00000176786 57 ntBASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gm28117-201ENSMUST00000188472 371 ntBASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gm6546-201ENSMUST00000192096 766 ntBASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Ighv10-4-201ENSMUST00000193702 299 ntBASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gm38384-201ENSMUST00000195413 1122 ntBASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gm43160-201ENSMUST00000196453 421 ntBASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gm20177-201ENSMUST00000203705 334 ntBASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gm43867-201ENSMUST00000203860 525 ntBASIC8.07□□□□□ -1.12
Brf1Q8CFK2 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gm44194-201ENSMUST00000204222 3229 ntBASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gm43285-201ENSMUST00000196563 3592 ntBASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC8.07□□□□□ -1.12
Brf1Q8CFK2 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 AC122346.1-201ENSMUST00000225266 3732 ntBASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm42763-201ENSMUST00000199595 2087 ntBASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm7113-201ENSMUST00000120477 958 ntBASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm8609-201ENSMUST00000182967 998 ntBASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm29240-201ENSMUST00000187248 286 ntBASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm37637-201ENSMUST00000195540 1256 ntBASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm22711-202ENSMUST00000197029 135 ntBASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm17918-201ENSMUST00000205315 574 ntBASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm32983-201ENSMUST00000208500 505 ntBASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm9267-201ENSMUST00000222831 404 ntBASIC8.06□□□□□ -1.12
Brf1Q8CFK2 n-R5s41-201ENSMUST00000083025 119 ntBASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm6419-201ENSMUST00000097166 429 ntBASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC8.06□□□□□ -1.12
Brf1Q8CFK2 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms