Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Gm38291-201ENSMUST00000193671 259 ntBASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Gm44225-201ENSMUST00000203582 186 ntBASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Gm45319-201ENSMUST00000210220 318 ntBASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Gm18503-201ENSMUST00000220340 728 ntBASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Gm18618-201ENSMUST00000222211 473 ntBASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Gm44289-201ENSMUST00000204144 1390 ntBASIC6.9□□□□□ -1.31
Ccdc28aQ8CEI3 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Ccdc28aQ8CEI3 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Ccdc28aQ8CEI3 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Ccdc28aQ8CEI3 Gm45360-201ENSMUST00000210698 1405 ntBASIC6.9□□□□□ -1.31
Ccdc28aQ8CEI3 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Ccdc28aQ8CEI3 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Ccdc28aQ8CEI3 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC6.9□□□□□ -1.31
Ccdc28aQ8CEI3 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Ccdc28aQ8CEI3 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Ccdc28aQ8CEI3 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Ccdc28aQ8CEI3 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.9□□□□□ -1.31
Ccdc28aQ8CEI3 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Ccdc28aQ8CEI3 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Ccdc28aQ8CEI3 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Ccdc28aQ8CEI3 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Gm15310-201ENSMUST00000117891 372 ntBASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Gm13604-201ENSMUST00000119332 482 ntBASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Gm14070-201ENSMUST00000120773 428 ntBASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Gm27014-201ENSMUST00000182658 937 ntBASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Gm9604-201ENSMUST00000211175 433 ntBASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Gm35619-201ENSMUST00000222548 600 ntBASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 AC098728.1-202ENSMUST00000226656 2198 ntBASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.89□□□□□ -1.31
Ccdc28aQ8CEI3 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Gm37925-201ENSMUST00000195352 4255 ntBASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Gm37186-201ENSMUST00000195629 2861 ntBASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Gm11590-201ENSMUST00000118999 1455 ntBASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Gm15621-201ENSMUST00000119162 364 ntBASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Gm14465-201ENSMUST00000120603 567 ntBASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Gm14300-201ENSMUST00000120800 946 ntBASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Gm12094-201ENSMUST00000121781 472 ntBASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Gm22094-201ENSMUST00000158976 117 ntBASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Gm27026-201ENSMUST00000183003 892 ntBASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Gm34144-201ENSMUST00000197039 259 ntBASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC6.88□□□□□ -1.31
Ccdc28aQ8CEI3 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms