Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm10259-201ENSMUST00000091289 1590 ntBASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Mir708-201ENSMUST00000102189 109 ntBASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Gm11858-201ENSMUST00000117935 838 ntBASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Gm15316-201ENSMUST00000121082 421 ntBASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Gm17786-201ENSMUST00000182000 427 ntBASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Gm19739-201ENSMUST00000195941 153 ntBASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Gm8182-201ENSMUST00000197863 769 ntBASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Igkv4-77-201ENSMUST00000199410 352 ntBASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Gm42883-201ENSMUST00000202594 222 ntBASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Gm44111-201ENSMUST00000204649 399 ntBASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Gm45725-201ENSMUST00000212962 337 ntBASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 AC151901.1-201ENSMUST00000218274 180 ntBASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Gm8275-201ENSMUST00000219732 424 ntBASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 AC131033.1-201ENSMUST00000228223 279 ntBASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 AC115735.5-201ENSMUST00000228386 397 ntBASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Gm20749-201ENSMUST00000186319 3492 ntBASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Lrif1Q8CDD9 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Gm11342-203ENSMUST00000224879 1324 ntBASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Gm8534-201ENSMUST00000118553 766 ntBASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Gm13900-201ENSMUST00000119402 498 ntBASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Gm13222-201ENSMUST00000119638 138 ntBASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Gm11338-201ENSMUST00000120086 1160 ntBASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Gm11882-201ENSMUST00000121463 506 ntBASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Gm17212-201ENSMUST00000166666 259 ntBASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Mir7084-201ENSMUST00000183876 70 ntBASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Gm27185-201ENSMUST00000184296 247 ntBASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Gm18501-201ENSMUST00000185363 664 ntBASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Gm24826-202ENSMUST00000197298 216 ntBASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Gm17833-201ENSMUST00000197629 1065 ntBASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 AL837512.1-201ENSMUST00000223914 1073 ntBASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 AC124450.1-201ENSMUST00000225569 495 ntBASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Gm5321-201ENSMUST00000072050 447 ntBASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.57□□□□□ -1.36
Lrif1Q8CDD9 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 110.2 ms