Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm9529-201ENSMUST00000177598 579 ntBASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Gm21839-201ENSMUST00000179536 378 ntBASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Ighv1-30-201ENSMUST00000194082 349 ntBASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Gm9517-201ENSMUST00000195021 874 ntBASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Gm7769-201ENSMUST00000212900 933 ntBASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Gm19324-201ENSMUST00000213229 1169 ntBASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 CT009711.2-201ENSMUST00000225352 934 ntBASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 CT030254.1-201ENSMUST00000225450 1078 ntBASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 AC116591.1-201ENSMUST00000227919 351 ntBASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Gm37945-201ENSMUST00000192536 4367 ntBASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Gm9575-201ENSMUST00000122140 1339 ntBASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC8.01□□□□□ -1.13
Atg4aQ8C9S8 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC8□□□□□ -1.13
Atg4aQ8C9S8 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm14976-201ENSMUST00000117055 1394 ntBASIC8□□□□□ -1.13
Atg4aQ8C9S8 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm26422-201ENSMUST00000104276 132 ntBASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm12540-201ENSMUST00000121938 319 ntBASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm23426-201ENSMUST00000122483 318 ntBASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm25435-201ENSMUST00000158277 267 ntBASIC8□□□□□ -1.13
Atg4aQ8C9S8 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm17847-201ENSMUST00000188261 1127 ntBASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm8479-201ENSMUST00000203825 718 ntBASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm6290-201ENSMUST00000207666 1158 ntBASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm2225-201ENSMUST00000209570 377 ntBASIC8□□□□□ -1.13
Atg4aQ8C9S8 AC073947.1-201ENSMUST00000216991 649 ntBASIC8□□□□□ -1.13
Atg4aQ8C9S8 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC8□□□□□ -1.13
Atg4aQ8C9S8 AC154323.2-201ENSMUST00000226557 1151 ntBASIC8□□□□□ -1.13
Atg4aQ8C9S8 AC116319.2-201ENSMUST00000228159 984 ntBASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm9788-201ENSMUST00000057038 906 ntBASIC8□□□□□ -1.13
Atg4aQ8C9S8 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm28392-201ENSMUST00000077630 393 ntBASIC8□□□□□ -1.13
Atg4aQ8C9S8 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Atg4aQ8C9S8 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Atg4aQ8C9S8 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
Atg4aQ8C9S8 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Atg4aQ8C9S8 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC7.99□□□□□ -1.13
Atg4aQ8C9S8 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC7.99□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms