Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.83□□□□□ -1.32
Trub1Q8C0D0 AC153143.2-201ENSMUST00000220999 1804 ntBASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Trub1Q8C0D0 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm37283-201ENSMUST00000193111 1571 ntBASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm18701-201ENSMUST00000188281 1536 ntBASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm24869-201ENSMUST00000104072 128 ntBASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm8715-201ENSMUST00000162728 531 ntBASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm9064-201ENSMUST00000163579 566 ntBASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm22990-201ENSMUST00000175427 89 ntBASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC6.82□□□□□ -1.32
Trub1Q8C0D0 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm8506-201ENSMUST00000186661 829 ntBASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm37620-201ENSMUST00000192910 501 ntBASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm36932-201ENSMUST00000195226 929 ntBASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm42752-201ENSMUST00000198394 1106 ntBASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm43377-201ENSMUST00000201640 455 ntBASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm18012-201ENSMUST00000204558 773 ntBASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm2754-201ENSMUST00000223383 589 ntBASIC6.82□□□□□ -1.32
Trub1Q8C0D0 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.82□□□□□ -1.32
Trub1Q8C0D0 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm28392-201ENSMUST00000077630 393 ntBASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.82□□□□□ -1.32
Trub1Q8C0D0 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trub1Q8C0D0 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trub1Q8C0D0 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Gm8177-201ENSMUST00000181591 1336 ntBASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Gm45657-201ENSMUST00000211318 1349 ntBASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Gm9403-201ENSMUST00000196299 2181 ntBASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Gm24173-201ENSMUST00000104130 128 ntBASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Trub1Q8C0D0 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Gm8215-201ENSMUST00000120627 990 ntBASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Gm14353-201ENSMUST00000122200 869 ntBASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Gm12778-201ENSMUST00000122341 333 ntBASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC6.81□□□□□ -1.32
Trub1Q8C0D0 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Mir7005-201ENSMUST00000185089 69 ntBASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Gm28929-201ENSMUST00000185330 1193 ntBASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Gm28443-201ENSMUST00000189081 698 ntBASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Gm18849-201ENSMUST00000189861 560 ntBASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Trbv9-201ENSMUST00000194494 290 ntBASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Gm43383-201ENSMUST00000195981 469 ntBASIC6.81□□□□□ -1.32
Trub1Q8C0D0 Gm43867-201ENSMUST00000203860 525 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms