Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 AC122858.3-201ENSMUST00000226341 740 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm38331-201ENSMUST00000195719 2671 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Sfmbt1-204ENSMUST00000227303 2960 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 AC120153.1-201ENSMUST00000226502 1311 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm23546-201ENSMUST00000158211 137 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm7426-201ENSMUST00000179046 404 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 n-R5s85-201ENSMUST00000083453 113 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 AC122426.1-201ENSMUST00000214736 2235 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm37786-201ENSMUST00000191714 3225 ntBASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Gm26748-201ENSMUST00000180406 2972 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Myt1-201ENSMUST00000081125 5327 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 n-R5s19-201ENSMUST00000122793 120 ntBASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Gm22355-201ENSMUST00000175531 96 ntBASIC6.24□□□□□ -1.41
Spg11Q3UHA3 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Gm18800-202ENSMUST00000188688 1105 ntBASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Gm43148-201ENSMUST00000198237 520 ntBASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Gm42767-201ENSMUST00000198583 632 ntBASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Gm44330-201ENSMUST00000200106 143 ntBASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Gm10688-201ENSMUST00000214985 520 ntBASIC6.24□□□□□ -1.41
Spg11Q3UHA3 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 AC132833.4-201ENSMUST00000228313 203 ntBASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Slco1b2-204ENSMUST00000203597 1965 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Gm24473-201ENSMUST00000104483 131 ntBASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Gm15480-201ENSMUST00000120442 519 ntBASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Gm22636-201ENSMUST00000158142 275 ntBASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Gm21735-201ENSMUST00000190360 696 ntBASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Gm37380-201ENSMUST00000193752 397 ntBASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Gm20926-201ENSMUST00000194457 696 ntBASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Gm9292-201ENSMUST00000222008 710 ntBASIC6.24□□□□□ -1.41
Spg11Q3UHA3 AC154861.1-201ENSMUST00000223767 800 ntBASIC6.24□□□□□ -1.41
Spg11Q3UHA3 AC124709.3-201ENSMUST00000227294 171 ntBASIC6.24□□□□□ -1.41
Spg11Q3UHA3 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Gm18313-201ENSMUST00000221036 1784 ntBASIC6.24□□□□□ -1.41
Spg11Q3UHA3 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Spg11Q3UHA3 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Spg11Q3UHA3 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Spg11Q3UHA3 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Spg11Q3UHA3 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Spg11Q3UHA3 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Spg11Q3UHA3 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Spg11Q3UHA3 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Spg11Q3UHA3 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC6.23□□□□□ -1.41
Spg11Q3UHA3 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Spg11Q3UHA3 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Spg11Q3UHA3 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Spg11Q3UHA3 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Spg11Q3UHA3 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Spg11Q3UHA3 Il1rl2-201ENSMUST00000095020 1950 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Spg11Q3UHA3 Gm4767-202ENSMUST00000188096 4725 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms