Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Gm38178-201ENSMUST00000194502 2471 ntBASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Gm37863-201ENSMUST00000194911 1457 ntBASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Gm22707-201ENSMUST00000103834 110 ntBASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Gm15048-201ENSMUST00000118201 954 ntBASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Gm14869-201ENSMUST00000119007 884 ntBASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Gm6067-201ENSMUST00000121648 491 ntBASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Gm2976-201ENSMUST00000160362 513 ntBASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Gm17212-201ENSMUST00000166666 259 ntBASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Gm8895-201ENSMUST00000172300 1223 ntBASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Gm7481-201ENSMUST00000182020 995 ntBASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Gm38373-201ENSMUST00000192042 288 ntBASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Gm30517-201ENSMUST00000197350 772 ntBASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Gm2221-201ENSMUST00000209342 418 ntBASIC7.07□□□□□ -1.28
Trim43aQ3TL54 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 AC173482.3-201ENSMUST00000225492 1212 ntBASIC7.07□□□□□ -1.28
Trim43aQ3TL54 CT025667.1-201ENSMUST00000225872 382 ntBASIC7.07□□□□□ -1.28
Trim43aQ3TL54 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 AC155234.1-201ENSMUST00000225610 2823 ntBASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 AC114585.1-201ENSMUST00000228080 3680 ntBASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Gm42541-201ENSMUST00000199871 2249 ntBASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Trim43aQ3TL54 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 AC118639.1-203ENSMUST00000228425 2016 ntBASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Gm13798-201ENSMUST00000118285 139 ntBASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Gm15538-201ENSMUST00000121410 313 ntBASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Gm7599-201ENSMUST00000121453 796 ntBASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Gm14613-201ENSMUST00000122239 752 ntBASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Gm27684-201ENSMUST00000183778 80 ntBASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Gm27866-201ENSMUST00000184459 171 ntBASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Gm6472-202ENSMUST00000187973 582 ntBASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Gm21301-201ENSMUST00000189476 699 ntBASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Gm37383-201ENSMUST00000191750 745 ntBASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Ighv1-21-201ENSMUST00000194856 351 ntBASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Gm17918-201ENSMUST00000205315 574 ntBASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Gm44984-201ENSMUST00000207802 394 ntBASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Gm10126-201ENSMUST00000221732 168 ntBASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Gm18618-201ENSMUST00000222211 473 ntBASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim43aQ3TL54 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 106.4 ms