Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col8a1Q00780 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC6.32□□□□□ -1.4
Col8a1Q00780 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a1Q00780 AC131743.4-201ENSMUST00000221638 1553 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a1Q00780 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a1Q00780 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a1Q00780 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a1Q00780 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Col8a1Q00780 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col8a1Q00780 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col8a1Q00780 AC156645.1-201ENSMUST00000223066 5194 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm45873-201ENSMUST00000211865 1915 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 Zfp474-202ENSMUST00000209270 2113 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a1Q00780 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a1Q00780 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm43331-201ENSMUST00000197991 1689 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC6.31□□□□□ -1.4
Col8a1Q00780 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm26416-201ENSMUST00000104280 134 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm24374-201ENSMUST00000104394 106 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm14606-201ENSMUST00000117078 1155 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm12244-201ENSMUST00000119500 291 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm15488-201ENSMUST00000121682 670 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm14747-201ENSMUST00000149888 984 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm9890-201ENSMUST00000171867 537 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a1Q00780 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 Mir5110-201ENSMUST00000175537 87 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm21614-201ENSMUST00000183260 1005 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC6.31□□□□□ -1.4
Col8a1Q00780 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a1Q00780 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm4751-201ENSMUST00000200620 1105 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC6.31□□□□□ -1.4
Col8a1Q00780 AC155709.1-201ENSMUST00000218794 162 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 AV026068-224ENSMUST00000224827 928 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 AC164295.1-201ENSMUST00000224861 186 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 AC164116.2-201ENSMUST00000225398 1038 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 AC154461.5-201ENSMUST00000225429 774 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 AC124489.1-201ENSMUST00000225852 526 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm6436-201ENSMUST00000077163 451 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col8a1Q00780 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm25586-201ENSMUST00000082499 112 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 n-R5s169-201ENSMUST00000083110 120 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm37611-201ENSMUST00000195250 2028 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a1Q00780 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a1Q00780 AC151984.1-201ENSMUST00000218261 2976 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a1Q00780 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC6.31□□□□□ -1.4
Col8a1Q00780 Zfp758-204ENSMUST00000149699 2876 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col8a1Q00780 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm42613-201ENSMUST00000199975 1931 ntBASIC6.31□□□□□ -1.4
Col8a1Q00780 Gm28720-201ENSMUST00000190728 3156 ntBASIC6.3□□□□□ -1.4
Col8a1Q00780 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Col8a1Q00780 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a1Q00780 AC154257.1-201ENSMUST00000224811 1525 ntBASIC6.3□□□□□ -1.4
Col8a1Q00780 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.3□□□□□ -1.4
Col8a1Q00780 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col8a1Q00780 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a1Q00780 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a1Q00780 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a1Q00780 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Col8a1Q00780 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a1Q00780 Gm42648-201ENSMUST00000200774 2505 ntBASIC6.3□□□□□ -1.4
Col8a1Q00780 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a1Q00780 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC6.3□□□□□ -1.4
Col8a1Q00780 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a1Q00780 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a1Q00780 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col8a1Q00780 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a1Q00780 Gm7265-201ENSMUST00000192735 3502 ntBASIC6.3□□□□□ -1.4
Col8a1Q00780 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Col8a1Q00780 Gm13229-201ENSMUST00000118238 340 ntBASIC6.3□□□□□ -1.4
Col8a1Q00780 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col8a1Q00780 Gm15644-201ENSMUST00000121764 387 ntBASIC6.3□□□□□ -1.4
Col8a1Q00780 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a1Q00780 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col8a1Q00780 Gm23903-201ENSMUST00000157566 131 ntBASIC6.3□□□□□ -1.4
Col8a1Q00780 Gm10177-201ENSMUST00000160052 444 ntBASIC6.3□□□□□ -1.4
Col8a1Q00780 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms