Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CiitaP79621 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
CiitaP79621 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC7.34□□□□□ -1.23
CiitaP79621 AC174797.5-201ENSMUST00000225055 1860 ntBASIC7.34□□□□□ -1.23
CiitaP79621 Gm37925-201ENSMUST00000195352 4255 ntBASIC7.34□□□□□ -1.23
CiitaP79621 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC7.34□□□□□ -1.23
CiitaP79621 Gm37653-201ENSMUST00000195401 3578 ntBASIC7.34□□□□□ -1.24
CiitaP79621 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC7.34□□□□□ -1.24
CiitaP79621 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
CiitaP79621 Gm44185-201ENSMUST00000204539 3307 ntBASIC7.34□□□□□ -1.24
CiitaP79621 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CiitaP79621 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CiitaP79621 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
CiitaP79621 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC7.33□□□□□ -1.24
CiitaP79621 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CiitaP79621 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CiitaP79621 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CiitaP79621 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CiitaP79621 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
CiitaP79621 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
CiitaP79621 Gm14935-201ENSMUST00000121528 1708 ntBASIC7.33□□□□□ -1.24
CiitaP79621 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CiitaP79621 AC139350.2-201ENSMUST00000226508 2331 ntBASIC7.33□□□□□ -1.24
CiitaP79621 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CiitaP79621 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC7.33□□□□□ -1.24
CiitaP79621 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CiitaP79621 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC7.33□□□□□ -1.24
CiitaP79621 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
CiitaP79621 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CiitaP79621 Gm22267-201ENSMUST00000104008 131 ntBASIC7.33□□□□□ -1.24
CiitaP79621 Gm12842-201ENSMUST00000117298 476 ntBASIC7.33□□□□□ -1.24
CiitaP79621 Gm6654-201ENSMUST00000118950 348 ntBASIC7.33□□□□□ -1.24
CiitaP79621 Gm11445-201ENSMUST00000119101 532 ntBASIC7.33□□□□□ -1.24
CiitaP79621 Gm15158-201ENSMUST00000120577 570 ntBASIC7.33□□□□□ -1.24
CiitaP79621 Gm7494-201ENSMUST00000121248 441 ntBASIC7.33□□□□□ -1.24
CiitaP79621 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CiitaP79621 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CiitaP79621 Gm18808-201ENSMUST00000173316 462 ntBASIC7.33□□□□□ -1.24
CiitaP79621 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CiitaP79621 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CiitaP79621 Mir6348-201ENSMUST00000183804 120 ntBASIC7.33□□□□□ -1.24
CiitaP79621 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
CiitaP79621 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC7.33□□□□□ -1.24
CiitaP79621 Gm43772-201ENSMUST00000202052 379 ntBASIC7.33□□□□□ -1.24
CiitaP79621 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC7.33□□□□□ -1.24
CiitaP79621 Gm32983-201ENSMUST00000208500 505 ntBASIC7.33□□□□□ -1.24
CiitaP79621 Gm45626-201ENSMUST00000210093 361 ntBASIC7.33□□□□□ -1.24
CiitaP79621 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC7.33□□□□□ -1.24
CiitaP79621 AC122327.2-201ENSMUST00000220883 120 ntBASIC7.33□□□□□ -1.24
CiitaP79621 AC122327.3-201ENSMUST00000221852 120 ntBASIC7.33□□□□□ -1.24
CiitaP79621 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CiitaP79621 Gm19154-201ENSMUST00000223330 940 ntBASIC7.33□□□□□ -1.24
CiitaP79621 AC166341.1-201ENSMUST00000223360 105 ntBASIC7.33□□□□□ -1.24
CiitaP79621 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CiitaP79621 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CiitaP79621 Gm26226-201ENSMUST00000082509 116 ntBASIC7.33□□□□□ -1.24
CiitaP79621 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CiitaP79621 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CiitaP79621 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
CiitaP79621 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
CiitaP79621 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC7.33□□□□□ -1.24
CiitaP79621 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
CiitaP79621 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CiitaP79621 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
CiitaP79621 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
CiitaP79621 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
CiitaP79621 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC7.33□□□□□ -1.24
CiitaP79621 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC7.33□□□□□ -1.24
CiitaP79621 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC7.33□□□□□ -1.24
CiitaP79621 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CiitaP79621 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CiitaP79621 Gm43022-201ENSMUST00000197067 4268 ntBASIC7.32□□□□□ -1.24
CiitaP79621 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CiitaP79621 Gm37518-201ENSMUST00000194930 2603 ntBASIC7.32□□□□□ -1.24
CiitaP79621 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CiitaP79621 Gm9575-201ENSMUST00000122140 1339 ntBASIC7.32□□□□□ -1.24
CiitaP79621 Gm31049-201ENSMUST00000201516 1302 ntBASIC7.32□□□□□ -1.24
CiitaP79621 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CiitaP79621 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CiitaP79621 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CiitaP79621 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CiitaP79621 Gm43876-201ENSMUST00000203831 3229 ntBASIC7.32□□□□□ -1.24
CiitaP79621 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CiitaP79621 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CiitaP79621 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC7.32□□□□□ -1.24
CiitaP79621 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CiitaP79621 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC7.32□□□□□ -1.24
CiitaP79621 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CiitaP79621 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CiitaP79621 Gm12653-201ENSMUST00000117778 561 ntBASIC7.32□□□□□ -1.24
CiitaP79621 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CiitaP79621 Gm11370-201ENSMUST00000120583 260 ntBASIC7.32□□□□□ -1.24
CiitaP79621 Gm11472-201ENSMUST00000121305 556 ntBASIC7.32□□□□□ -1.24
CiitaP79621 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CiitaP79621 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC7.32□□□□□ -1.24
CiitaP79621 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CiitaP79621 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CiitaP79621 Gm20454-201ENSMUST00000172713 221 ntBASIC7.32□□□□□ -1.24
CiitaP79621 Gm24155-201ENSMUST00000175259 110 ntBASIC7.32□□□□□ -1.24
CiitaP79621 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC7.32□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms