Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm23734-201ENSMUST00000083753 109 ntBASIC6.13□□□□□ -1.43
Cdh11P55288 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Cdh11P55288 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdh11P55288 Gm44289-201ENSMUST00000204144 1390 ntBASIC6.13□□□□□ -1.43
Cdh11P55288 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Cdh11P55288 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Cdh11P55288 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Cdh11P55288 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC6.13□□□□□ -1.43
Cdh11P55288 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Cdh11P55288 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdh11P55288 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Cdh11P55288 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdh11P55288 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.12□□□□□ -1.43
Cdh11P55288 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Cdh11P55288 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdh11P55288 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.12□□□□□ -1.43
Cdh11P55288 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.12□□□□□ -1.43
Cdh11P55288 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Cdh11P55288 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdh11P55288 Gm13423-201ENSMUST00000117205 888 ntBASIC6.12□□□□□ -1.43
Cdh11P55288 Gm13798-201ENSMUST00000118285 139 ntBASIC6.12□□□□□ -1.43
Cdh11P55288 Gm12174-201ENSMUST00000119853 813 ntBASIC6.12□□□□□ -1.43
Cdh11P55288 Gm26480-201ENSMUST00000122619 297 ntBASIC6.12□□□□□ -1.43
Cdh11P55288 Gm23888-201ENSMUST00000122690 253 ntBASIC6.12□□□□□ -1.43
Cdh11P55288 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdh11P55288 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdh11P55288 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdh11P55288 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdh11P55288 Gm24680-201ENSMUST00000158759 126 ntBASIC6.12□□□□□ -1.43
Cdh11P55288 Mir1930-201ENSMUST00000158799 84 ntBASIC6.12□□□□□ -1.43
Cdh11P55288 Gm6264-201ENSMUST00000160802 624 ntBASIC6.12□□□□□ -1.43
Cdh11P55288 Gm17212-201ENSMUST00000166666 259 ntBASIC6.12□□□□□ -1.43
Cdh11P55288 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.12□□□□□ -1.43
Cdh11P55288 Gm26570-201ENSMUST00000180672 342 ntBASIC6.12□□□□□ -1.43
Cdh11P55288 Mir6241-201ENSMUST00000184225 103 ntBASIC6.12□□□□□ -1.43
Cdh11P55288 Mir8105-201ENSMUST00000184718 89 ntBASIC6.12□□□□□ -1.43
Cdh11P55288 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdh11P55288 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC6.12□□□□□ -1.43
Cdh11P55288 Gm37518-201ENSMUST00000194930 2603 ntBASIC6.12□□□□□ -1.43
Cdh11P55288 Gm37973-201ENSMUST00000195767 1289 ntBASIC6.12□□□□□ -1.43
Cdh11P55288 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdh11P55288 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdh11P55288 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdh11P55288 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC6.12□□□□□ -1.43
Cdh11P55288 Gm43929-201ENSMUST00000203025 409 ntBASIC6.12□□□□□ -1.43
Cdh11P55288 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdh11P55288 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC6.12□□□□□ -1.43
Cdh11P55288 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Cdh11P55288 Gm45786-201ENSMUST00000213021 2278 ntBASIC6.12□□□□□ -1.43
Cdh11P55288 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC6.12□□□□□ -1.43
Cdh11P55288 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC6.12□□□□□ -1.43
Cdh11P55288 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdh11P55288 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdh11P55288 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdh11P55288 AC124489.1-201ENSMUST00000225852 526 ntBASIC6.12□□□□□ -1.43
Cdh11P55288 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Cdh11P55288 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC6.12□□□□□ -1.43
Cdh11P55288 Gm5446-201ENSMUST00000091762 784 ntBASIC6.12□□□□□ -1.43
Cdh11P55288 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdh11P55288 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Cdh11P55288 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdh11P55288 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdh11P55288 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Cdh11P55288 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdh11P55288 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdh11P55288 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdh11P55288 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Cdh11P55288 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cdh11P55288 Gm9030-201ENSMUST00000218405 2410 ntBASIC6.11□□□□□ -1.43
Cdh11P55288 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cdh11P55288 Gm9029-201ENSMUST00000219232 2410 ntBASIC6.11□□□□□ -1.43
Cdh11P55288 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cdh11P55288 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cdh11P55288 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Cdh11P55288 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdh11P55288 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.11□□□□□ -1.43
Cdh11P55288 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Cdh11P55288 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdh11P55288 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Cdh11P55288 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdh11P55288 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Cdh11P55288 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdh11P55288 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdh11P55288 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdh11P55288 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdh11P55288 Gm22231-201ENSMUST00000101027 73 ntBASIC6.11□□□□□ -1.43
Cdh11P55288 Gm22781-201ENSMUST00000104083 137 ntBASIC6.11□□□□□ -1.43
Cdh11P55288 Gm26416-201ENSMUST00000104280 134 ntBASIC6.11□□□□□ -1.43
Cdh11P55288 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdh11P55288 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC6.11□□□□□ -1.43
Cdh11P55288 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC6.11□□□□□ -1.43
Cdh11P55288 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdh11P55288 Gm15712-201ENSMUST00000120369 1156 ntBASIC6.11□□□□□ -1.43
Cdh11P55288 Gm7746-201ENSMUST00000120966 503 ntBASIC6.11□□□□□ -1.43
Cdh11P55288 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdh11P55288 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdh11P55288 Gm16138-201ENSMUST00000159341 821 ntBASIC6.11□□□□□ -1.43
Cdh11P55288 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdh11P55288 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Cdh11P55288 Gm22642-201ENSMUST00000175352 252 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms