Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rfx1P48377 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Rfx1P48377 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rfx1P48377 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rfx1P48377 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Rfx1P48377 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC8.59□□□□□ -1.03
Rfx1P48377 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rfx1P48377 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Rfx1P48377 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.04
Rfx1P48377 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
Rfx1P48377 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rfx1P48377 Gm8836-201ENSMUST00000198196 1348 ntBASIC8.58□□□□□ -1.04
Rfx1P48377 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rfx1P48377 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rfx1P48377 Gm28667-201ENSMUST00000189873 2171 ntBASIC8.58□□□□□ -1.04
Rfx1P48377 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Rfx1P48377 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rfx1P48377 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rfx1P48377 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Rfx1P48377 Mir669e-201ENSMUST00000117003 119 ntBASIC8.58□□□□□ -1.04
Rfx1P48377 Gm13137-201ENSMUST00000118035 345 ntBASIC8.58□□□□□ -1.04
Rfx1P48377 Gm15160-201ENSMUST00000120553 907 ntBASIC8.58□□□□□ -1.04
Rfx1P48377 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rfx1P48377 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC8.58□□□□□ -1.04
Rfx1P48377 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rfx1P48377 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC8.58□□□□□ -1.04
Rfx1P48377 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC8.58□□□□□ -1.04
Rfx1P48377 Gm22795-201ENSMUST00000157233 118 ntBASIC8.58□□□□□ -1.04
Rfx1P48377 Gm22811-201ENSMUST00000157468 154 ntBASIC8.58□□□□□ -1.04
Rfx1P48377 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC8.58□□□□□ -1.04
Rfx1P48377 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rfx1P48377 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rfx1P48377 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC8.58□□□□□ -1.04
Rfx1P48377 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Rfx1P48377 Gm25947-201ENSMUST00000180343 110 ntBASIC8.58□□□□□ -1.04
Rfx1P48377 Gm27025-201ENSMUST00000182392 942 ntBASIC8.58□□□□□ -1.04
Rfx1P48377 Dlx6os1-204ENSMUST00000184182 146 ntBASIC8.58□□□□□ -1.04
Rfx1P48377 Mir6398-201ENSMUST00000184541 102 ntBASIC8.58□□□□□ -1.04
Rfx1P48377 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC8.58□□□□□ -1.04
Rfx1P48377 Gm5147-201ENSMUST00000185999 794 ntBASIC8.58□□□□□ -1.04
Rfx1P48377 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rfx1P48377 Gm28149-201ENSMUST00000187102 378 ntBASIC8.58□□□□□ -1.04
Rfx1P48377 Gm28768-201ENSMUST00000189034 378 ntBASIC8.58□□□□□ -1.04
Rfx1P48377 Gm37337-201ENSMUST00000192601 993 ntBASIC8.58□□□□□ -1.04
Rfx1P48377 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC8.58□□□□□ -1.04
Rfx1P48377 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC8.58□□□□□ -1.04
Rfx1P48377 Gm44356-201ENSMUST00000196731 111 ntBASIC8.58□□□□□ -1.04
Rfx1P48377 Gm43308-201ENSMUST00000197236 373 ntBASIC8.58□□□□□ -1.04
Rfx1P48377 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC8.58□□□□□ -1.04
Rfx1P48377 Gm44559-201ENSMUST00000207177 1012 ntBASIC8.58□□□□□ -1.04
Rfx1P48377 AL929555.1-201ENSMUST00000215283 509 ntBASIC8.58□□□□□ -1.04
Rfx1P48377 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Rfx1P48377 CT030254.3-201ENSMUST00000225959 1231 ntBASIC8.58□□□□□ -1.04
Rfx1P48377 Churc1-201ENSMUST00000041262 676 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rfx1P48377 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Rfx1P48377 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Rfx1P48377 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rfx1P48377 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rfx1P48377 Gm22043-201ENSMUST00000082993 158 ntBASIC8.58□□□□□ -1.04
Rfx1P48377 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Rfx1P48377 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC8.58□□□□□ -1.04
Rfx1P48377 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rfx1P48377 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rfx1P48377 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rfx1P48377 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Rfx1P48377 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Rfx1P48377 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Rfx1P48377 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Rfx1P48377 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rfx1P48377 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC8.57□□□□□ -1.04
Rfx1P48377 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC8.57□□□□□ -1.04
Rfx1P48377 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rfx1P48377 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rfx1P48377 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Rfx1P48377 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rfx1P48377 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rfx1P48377 Olfr353-201ENSMUST00000100149 936 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Rfx1P48377 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Rfx1P48377 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Rfx1P48377 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC8.57□□□□□ -1.04
Rfx1P48377 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 Gm1947-201ENSMUST00000122451 910 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 Gm24840-201ENSMUST00000122603 147 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC8.57□□□□□ -1.04
Rfx1P48377 Gm22186-201ENSMUST00000157822 122 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 Gm9149-201ENSMUST00000182724 1007 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 Gm27044-201ENSMUST00000183033 796 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 Gm26980-201ENSMUST00000183321 395 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC8.57□□□□□ -1.04
Rfx1P48377 Gm18350-201ENSMUST00000187395 955 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC8.57□□□□□ -1.04
Rfx1P48377 1700096J18Rik-201ENSMUST00000190043 482 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Rfx1P48377 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 Gm37678-201ENSMUST00000192908 1146 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC8.57□□□□□ -1.04
Rfx1P48377 Gm7299-201ENSMUST00000194441 581 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 Pisrt1-201ENSMUST00000195532 515 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 Gm34583-203ENSMUST00000202586 454 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 Gm5317-201ENSMUST00000204445 847 ntBASIC8.57□□□□□ -1.04
Rfx1P48377 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms