Protein–RNA interactions for Protein: P33215

Nedd1, Protein NEDD1, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1P33215 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Nedd1P33215 AC159205.2-201ENSMUST00000223759 816 ntBASIC8.33□□□□□ -1.08
Nedd1P33215 AC117949.1-201ENSMUST00000225547 419 ntBASIC8.33□□□□□ -1.08
Nedd1P33215 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Nedd1P33215 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nedd1P33215 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC8.33□□□□□ -1.08
Nedd1P33215 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
Nedd1P33215 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Nedd1P33215 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Nedd1P33215 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nedd1P33215 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nedd1P33215 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Nedd1P33215 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nedd1P33215 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nedd1P33215 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC8.33□□□□□ -1.08
Nedd1P33215 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC8.33□□□□□ -1.08
Nedd1P33215 AC155298.3-201ENSMUST00000225307 3220 ntBASIC8.33□□□□□ -1.08
Nedd1P33215 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC8.33□□□□□ -1.08
Nedd1P33215 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC8.33□□□□□ -1.08
Nedd1P33215 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nedd1P33215 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Nedd1P33215 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nedd1P33215 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nedd1P33215 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Nedd1P33215 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Nedd1P33215 AC154270.2-201ENSMUST00000226755 2306 ntBASIC8.32□□□□□ -1.08
Nedd1P33215 Gm37410-201ENSMUST00000193623 3039 ntBASIC8.32□□□□□ -1.08
Nedd1P33215 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nedd1P33215 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nedd1P33215 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nedd1P33215 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC8.32□□□□□ -1.08
Nedd1P33215 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nedd1P33215 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nedd1P33215 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC8.32□□□□□ -1.08
Nedd1P33215 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nedd1P33215 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nedd1P33215 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nedd1P33215 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nedd1P33215 AC192333.5-201ENSMUST00000224620 2350 ntBASIC8.32□□□□□ -1.08
Nedd1P33215 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nedd1P33215 Gm37706-201ENSMUST00000195379 2765 ntBASIC8.32□□□□□ -1.08
Nedd1P33215 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nedd1P33215 Gm44093-201ENSMUST00000204381 1802 ntBASIC8.32□□□□□ -1.08
Nedd1P33215 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nedd1P33215 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC8.32□□□□□ -1.08
Nedd1P33215 Gm13454-201ENSMUST00000118166 483 ntBASIC8.32□□□□□ -1.08
Nedd1P33215 Gm11517-201ENSMUST00000119491 387 ntBASIC8.32□□□□□ -1.08
Nedd1P33215 Gm15828-201ENSMUST00000119911 522 ntBASIC8.32□□□□□ -1.08
Nedd1P33215 Gm5135-201ENSMUST00000121100 573 ntBASIC8.32□□□□□ -1.08
Nedd1P33215 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Nedd1P33215 Gm22025-201ENSMUST00000122734 302 ntBASIC8.32□□□□□ -1.08
Nedd1P33215 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nedd1P33215 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC8.32□□□□□ -1.08
Nedd1P33215 Gm25219-201ENSMUST00000157545 330 ntBASIC8.32□□□□□ -1.08
Nedd1P33215 Gm25180-201ENSMUST00000157746 115 ntBASIC8.32□□□□□ -1.08
Nedd1P33215 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nedd1P33215 Gm6472-202ENSMUST00000187973 582 ntBASIC8.32□□□□□ -1.08
Nedd1P33215 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC8.32□□□□□ -1.08
Nedd1P33215 Gm8921-201ENSMUST00000204306 649 ntBASIC8.32□□□□□ -1.08
Nedd1P33215 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC8.32□□□□□ -1.08
Nedd1P33215 Gm29759-201ENSMUST00000205860 327 ntBASIC8.32□□□□□ -1.08
Nedd1P33215 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC8.32□□□□□ -1.08
Nedd1P33215 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC8.32□□□□□ -1.08
Nedd1P33215 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC8.32□□□□□ -1.08
Nedd1P33215 AC120002.1-201ENSMUST00000218456 331 ntBASIC8.32□□□□□ -1.08
Nedd1P33215 AC154851.1-201ENSMUST00000221591 655 ntBASIC8.32□□□□□ -1.08
Nedd1P33215 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nedd1P33215 AC154806.1-203ENSMUST00000227370 1032 ntBASIC8.32□□□□□ -1.08
Nedd1P33215 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Nedd1P33215 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC8.32□□□□□ -1.08
Nedd1P33215 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nedd1P33215 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nedd1P33215 Gm17791-201ENSMUST00000185660 1501 ntBASIC8.32□□□□□ -1.08
Nedd1P33215 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nedd1P33215 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nedd1P33215 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
Nedd1P33215 Gm43113-201ENSMUST00000199713 1754 ntBASIC8.32□□□□□ -1.08
Nedd1P33215 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nedd1P33215 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC8.32□□□□□ -1.08
Nedd1P33215 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nedd1P33215 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nedd1P33215 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Nedd1P33215 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nedd1P33215 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nedd1P33215 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Nedd1P33215 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Nedd1P33215 Gm12667-201ENSMUST00000118299 1332 ntBASIC8.31□□□□□ -1.08
Nedd1P33215 Gm6640-201ENSMUST00000120629 1587 ntBASIC8.31□□□□□ -1.08
Nedd1P33215 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nedd1P33215 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Nedd1P33215 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Nedd1P33215 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Nedd1P33215 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Nedd1P33215 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC8.31□□□□□ -1.08
Nedd1P33215 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nedd1P33215 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nedd1P33215 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC8.31□□□□□ -1.08
Nedd1P33215 Gm37611-201ENSMUST00000195250 2028 ntBASIC8.31□□□□□ -1.08
Nedd1P33215 Gm37647-201ENSMUST00000194556 3143 ntBASIC8.31□□□□□ -1.08
Nedd1P33215 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 108.8 ms