Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm7244-201ENSMUST00000164658 455 ntBASIC6.67□□□□□ -1.34
Lire1P11260 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Lire1P11260 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Lire1P11260 Gm23187-201ENSMUST00000175746 86 ntBASIC6.67□□□□□ -1.34
Lire1P11260 Gm29562-201ENSMUST00000190113 904 ntBASIC6.67□□□□□ -1.34
Lire1P11260 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Lire1P11260 Gm19088-201ENSMUST00000198800 566 ntBASIC6.67□□□□□ -1.34
Lire1P11260 Gm44044-201ENSMUST00000205178 1089 ntBASIC6.67□□□□□ -1.34
Lire1P11260 Gm8489-201ENSMUST00000209876 1152 ntBASIC6.67□□□□□ -1.34
Lire1P11260 AC192091.1-201ENSMUST00000218668 439 ntBASIC6.67□□□□□ -1.34
Lire1P11260 Gm5791-201ENSMUST00000220840 489 ntBASIC6.67□□□□□ -1.34
Lire1P11260 AC126554.4-201ENSMUST00000221055 409 ntBASIC6.67□□□□□ -1.34
Lire1P11260 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Lire1P11260 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC6.67□□□□□ -1.34
Lire1P11260 AC115735.5-201ENSMUST00000228386 397 ntBASIC6.67□□□□□ -1.34
Lire1P11260 Glycam1-204ENSMUST00000228895 641 ntBASIC6.67□□□□□ -1.34
Lire1P11260 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Lire1P11260 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Lire1P11260 Gm25099-201ENSMUST00000093716 116 ntBASIC6.67□□□□□ -1.34
Lire1P11260 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
Lire1P11260 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Lire1P11260 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
Lire1P11260 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Lire1P11260 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.67□□□□□ -1.34
Lire1P11260 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC6.67□□□□□ -1.34
Lire1P11260 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Lire1P11260 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Lire1P11260 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Lire1P11260 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Lire1P11260 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Lire1P11260 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Lire1P11260 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Lire1P11260 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Lire1P11260 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Lire1P11260 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Lire1P11260 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Lire1P11260 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Lire1P11260 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.66□□□□□ -1.34
Lire1P11260 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC6.66□□□□□ -1.34
Lire1P11260 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Lire1P11260 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Lire1P11260 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Lire1P11260 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.66□□□□□ -1.34
Lire1P11260 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC6.66□□□□□ -1.34
Lire1P11260 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Lire1P11260 Gm38302-201ENSMUST00000191676 2076 ntBASIC6.66□□□□□ -1.34
Lire1P11260 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC6.66□□□□□ -1.34
Lire1P11260 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Lire1P11260 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Lire1P11260 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC6.66□□□□□ -1.34
Lire1P11260 Gm14509-201ENSMUST00000117312 1286 ntBASIC6.66□□□□□ -1.34
Lire1P11260 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Lire1P11260 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Lire1P11260 Gm4911-201ENSMUST00000119388 945 ntBASIC6.66□□□□□ -1.34
Lire1P11260 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC6.66□□□□□ -1.34
Lire1P11260 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC6.66□□□□□ -1.34
Lire1P11260 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Lire1P11260 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC6.66□□□□□ -1.34
Lire1P11260 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC6.66□□□□□ -1.34
Lire1P11260 Gm24824-201ENSMUST00000175097 78 ntBASIC6.66□□□□□ -1.34
Lire1P11260 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC6.66□□□□□ -1.34
Lire1P11260 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Lire1P11260 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Lire1P11260 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC6.66□□□□□ -1.34
Lire1P11260 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Lire1P11260 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC6.66□□□□□ -1.34
Lire1P11260 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC6.66□□□□□ -1.34
Lire1P11260 Gm43895-201ENSMUST00000203219 855 ntBASIC6.66□□□□□ -1.34
Lire1P11260 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Lire1P11260 Gm44277-201ENSMUST00000205128 649 ntBASIC6.66□□□□□ -1.34
Lire1P11260 Gm44931-201ENSMUST00000206056 545 ntBASIC6.66□□□□□ -1.34
Lire1P11260 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC6.66□□□□□ -1.34
Lire1P11260 Gm9240-201ENSMUST00000206527 742 ntBASIC6.66□□□□□ -1.34
Lire1P11260 Gm9685-201ENSMUST00000211275 538 ntBASIC6.66□□□□□ -1.34
Lire1P11260 CT025685.1-201ENSMUST00000213716 150 ntBASIC6.66□□□□□ -1.34
Lire1P11260 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Lire1P11260 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC6.66□□□□□ -1.34
Lire1P11260 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC6.66□□□□□ -1.34
Lire1P11260 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Lire1P11260 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Lire1P11260 AC125087.1-201ENSMUST00000227552 514 ntBASIC6.66□□□□□ -1.34
Lire1P11260 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Lire1P11260 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Lire1P11260 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Lire1P11260 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Lire1P11260 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Lire1P11260 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Lire1P11260 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Lire1P11260 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC6.66□□□□□ -1.34
Lire1P11260 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Lire1P11260 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.66□□□□□ -1.34
Lire1P11260 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Lire1P11260 Gm37132-201ENSMUST00000195553 2238 ntBASIC6.66□□□□□ -1.34
Lire1P11260 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Lire1P11260 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Lire1P11260 AC154141.1-201ENSMUST00000208403 4136 ntBASIC6.66□□□□□ -1.34
Lire1P11260 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Lire1P11260 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Lire1P11260 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Lire1P11260 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms