Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm9504-201ENSMUST00000196322 468 ntBASIC6.76□□□□□ -1.33
Srp54bE9PXC0 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Gm43725-201ENSMUST00000200122 369 ntBASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.76□□□□□ -1.33
Srp54bE9PXC0 AC107663.1-201ENSMUST00000224257 468 ntBASIC6.76□□□□□ -1.33
Srp54bE9PXC0 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.76□□□□□ -1.33
Srp54bE9PXC0 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Gm8177-201ENSMUST00000181591 1336 ntBASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Gm43019-201ENSMUST00000196948 2863 ntBASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Snhg17-209ENSMUST00000186993 3144 ntBASIC6.75□□□□□ -1.33
Srp54bE9PXC0 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Gm11590-201ENSMUST00000118999 1455 ntBASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Gm11853-201ENSMUST00000119687 1384 ntBASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Gm26340-201ENSMUST00000102365 99 ntBASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Mir674-201ENSMUST00000102421 100 ntBASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Gm25785-201ENSMUST00000104129 125 ntBASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Gm11472-201ENSMUST00000121305 556 ntBASIC6.75□□□□□ -1.33
Srp54bE9PXC0 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Mir1953-201ENSMUST00000157866 89 ntBASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC6.75□□□□□ -1.33
Srp54bE9PXC0 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Gm8607-201ENSMUST00000221864 431 ntBASIC6.75□□□□□ -1.33
Srp54bE9PXC0 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Srp54bE9PXC0 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm37925-201ENSMUST00000195352 4255 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm43343-201ENSMUST00000202454 1926 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 AC158537.1-201ENSMUST00000224637 1711 ntBASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Srp54bE9PXC0 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 128.6 ms