Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm16248-201ENSMUST00000124238 243 ntBASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Gm16284-201ENSMUST00000140995 400 ntBASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Gm16298-201ENSMUST00000161107 420 ntBASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Trbv9-201ENSMUST00000194494 290 ntBASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Gm43929-201ENSMUST00000203025 409 ntBASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Gm44111-201ENSMUST00000204649 399 ntBASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Gm19047-201ENSMUST00000220922 1099 ntBASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdc40Q9DC48 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm23768-201ENSMUST00000104440 131 ntBASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm13732-201ENSMUST00000117753 535 ntBASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm7494-201ENSMUST00000121248 441 ntBASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm14353-201ENSMUST00000122200 869 ntBASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm22552-201ENSMUST00000157796 337 ntBASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm7289-201ENSMUST00000168993 734 ntBASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm23945-201ENSMUST00000179609 92 ntBASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm26570-201ENSMUST00000180672 342 ntBASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Mir6921-201ENSMUST00000183719 80 ntBASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm29605-201ENSMUST00000190800 292 ntBASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm37383-201ENSMUST00000191750 745 ntBASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm37439-201ENSMUST00000193150 856 ntBASIC6.29□□□□□ -1.4
Cdc40Q9DC48 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm43048-201ENSMUST00000196101 388 ntBASIC6.29□□□□□ -1.4
Cdc40Q9DC48 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm21461-201ENSMUST00000200382 863 ntBASIC6.29□□□□□ -1.4
Cdc40Q9DC48 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm43377-201ENSMUST00000201640 455 ntBASIC6.29□□□□□ -1.4
Cdc40Q9DC48 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm17822-201ENSMUST00000204307 351 ntBASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm17834-201ENSMUST00000204322 891 ntBASIC6.29□□□□□ -1.4
Cdc40Q9DC48 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC6.29□□□□□ -1.4
Cdc40Q9DC48 AC153847.1-201ENSMUST00000214524 353 ntBASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 AL713985.1-201ENSMUST00000219030 420 ntBASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.29□□□□□ -1.4
Cdc40Q9DC48 AC174678.3-201ENSMUST00000227568 362 ntBASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm7690-201ENSMUST00000190885 1399 ntBASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdc40Q9DC48 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 AC130831.1-201ENSMUST00000224546 1474 ntBASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdc40Q9DC48 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms