Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm37535-201ENSMUST00000194442 2365 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 AC156636.1-201ENSMUST00000218639 2229 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm23437-201ENSMUST00000104036 127 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm13463-201ENSMUST00000119020 233 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm12807-201ENSMUST00000121546 962 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm14363-201ENSMUST00000122304 409 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm10157-201ENSMUST00000139408 343 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm23162-201ENSMUST00000175081 121 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm21959-201ENSMUST00000178439 452 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm27026-201ENSMUST00000183003 892 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm28973-201ENSMUST00000189310 613 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm37741-201ENSMUST00000191768 1256 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm37908-201ENSMUST00000195828 470 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm43147-201ENSMUST00000196944 542 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm8539-201ENSMUST00000199822 501 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm43108-201ENSMUST00000200525 293 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm44380-201ENSMUST00000203125 293 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm44979-201ENSMUST00000206218 287 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm31663-202ENSMUST00000208481 1190 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm20586-201ENSMUST00000210122 547 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm7986-201ENSMUST00000221336 551 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm46424-201ENSMUST00000221567 168 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 CT009711.2-202ENSMUST00000224538 973 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 AC131100.2-201ENSMUST00000227701 998 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm44704-201ENSMUST00000208963 1990 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm5702-201ENSMUST00000185629 2469 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Sec24c-202ENSMUST00000223751 4196 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Mir760-201ENSMUST00000103257 119 ntBASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Gm13506-201ENSMUST00000120391 1083 ntBASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Gm11910-201ENSMUST00000121624 432 ntBASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Gm25047-201ENSMUST00000122667 104 ntBASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Gm23276-201ENSMUST00000157913 138 ntBASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Gm26211-201ENSMUST00000158578 129 ntBASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Gm16456-201ENSMUST00000174431 920 ntBASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Gm26179-201ENSMUST00000177723 132 ntBASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Gm27044-201ENSMUST00000183033 796 ntBASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Gm29357-201ENSMUST00000186877 698 ntBASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Gm42673-201ENSMUST00000202676 337 ntBASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Gm44585-201ENSMUST00000207150 607 ntBASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Gm45100-201ENSMUST00000209153 391 ntBASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Gm4796-201ENSMUST00000219802 624 ntBASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Gm46231-201ENSMUST00000220152 314 ntBASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 AC122397.3-201ENSMUST00000227097 527 ntBASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 AC130219.2-201ENSMUST00000228765 807 ntBASIC7.37□□□□□ -1.23
Ddx56Q9D0R4 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms