Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm10364-202ENSMUST00000153034 1001 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm22223-201ENSMUST00000157360 125 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm16026-205ENSMUST00000162923 641 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm29048-201ENSMUST00000185342 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm29403-201ENSMUST00000185491 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28234-201ENSMUST00000185657 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28248-201ENSMUST00000186093 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm29633-202ENSMUST00000186217 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28829-201ENSMUST00000186231 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28261-201ENSMUST00000186417 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28815-201ENSMUST00000186751 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28608-201ENSMUST00000186860 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28122-201ENSMUST00000187088 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28420-201ENSMUST00000187340 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28106-201ENSMUST00000187640 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28698-201ENSMUST00000187734 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm29224-201ENSMUST00000187965 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm29189-201ENSMUST00000188018 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm29476-201ENSMUST00000188397 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm29505-201ENSMUST00000188424 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28125-201ENSMUST00000188470 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm29391-201ENSMUST00000188545 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm29280-201ENSMUST00000188571 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28349-201ENSMUST00000188590 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm29652-201ENSMUST00000188622 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28819-206ENSMUST00000188816 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm29079-201ENSMUST00000188875 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28213-201ENSMUST00000189183 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm29382-201ENSMUST00000189549 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm29377-205ENSMUST00000189603 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28327-201ENSMUST00000189638 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28790-201ENSMUST00000189642 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28907-201ENSMUST00000189700 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm29586-207ENSMUST00000189745 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm29115-201ENSMUST00000189870 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28366-201ENSMUST00000190147 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm29212-201ENSMUST00000190384 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm29533-201ENSMUST00000190403 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28162-201ENSMUST00000190545 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm29030-201ENSMUST00000190848 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28742-201ENSMUST00000191001 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28899-201ENSMUST00000191161 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm29567-201ENSMUST00000191188 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28222-201ENSMUST00000191210 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28776-201ENSMUST00000191282 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm29306-201ENSMUST00000191366 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm29618-201ENSMUST00000191423 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28136-210ENSMUST00000191432 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm29251-201ENSMUST00000191480 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm28658-201ENSMUST00000191532 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm32180-201ENSMUST00000192415 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm30598-201ENSMUST00000192620 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm37627-201ENSMUST00000194585 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm34274-201ENSMUST00000195825 615 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm43048-201ENSMUST00000196101 388 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm1969-201ENSMUST00000198125 1220 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 AC099934.1-201ENSMUST00000200493 79 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm44823-201ENSMUST00000204775 1107 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm19154-201ENSMUST00000223330 940 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 AC114008.1-201ENSMUST00000226193 937 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 AC116596.2-203ENSMUST00000227345 731 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 AC114585.1-201ENSMUST00000228080 3680 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm43189-201ENSMUST00000196040 3069 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm37535-201ENSMUST00000194442 2365 ntBASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 CT009480.2-201ENSMUST00000225152 3369 ntBASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Gm6327-201ENSMUST00000171185 1335 ntBASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms