Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 AC136376.1-201ENSMUST00000228496 950 ntBASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm37548-201ENSMUST00000194519 3814 ntBASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm42613-201ENSMUST00000199975 1931 ntBASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 AC154368.2-201ENSMUST00000222334 1724 ntBASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm37786-201ENSMUST00000191714 3225 ntBASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm43279-201ENSMUST00000202376 2512 ntBASIC8.32□□□□□ -1.08
Trim11Q99PQ2 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 AC135119.1-202ENSMUST00000228435 2203 ntBASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm26377-201ENSMUST00000102184 108 ntBASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm12075-201ENSMUST00000117426 397 ntBASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm13545-201ENSMUST00000119044 482 ntBASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm12123-201ENSMUST00000120348 472 ntBASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm15928-201ENSMUST00000122455 280 ntBASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm24883-201ENSMUST00000158391 281 ntBASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm24738-201ENSMUST00000158856 123 ntBASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm16027-201ENSMUST00000161618 758 ntBASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm27458-201ENSMUST00000185108 121 ntBASIC8.32□□□□□ -1.08
Trim11Q99PQ2 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm43212-201ENSMUST00000198208 394 ntBASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm7663-201ENSMUST00000201151 1240 ntBASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm7240-201ENSMUST00000220769 664 ntBASIC8.32□□□□□ -1.08
Trim11Q99PQ2 CT009556.3-201ENSMUST00000226173 513 ntBASIC8.32□□□□□ -1.08
Trim11Q99PQ2 AC166822.1-201ENSMUST00000227667 636 ntBASIC8.32□□□□□ -1.08
Trim11Q99PQ2 AC157212.1-201ENSMUST00000228398 1075 ntBASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm24613-201ENSMUST00000083266 130 ntBASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC8.32□□□□□ -1.08
Trim11Q99PQ2 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Gm44895-201ENSMUST00000206670 1538 ntBASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Gm15000-201ENSMUST00000118275 1243 ntBASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Gm11558-201ENSMUST00000118454 459 ntBASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Gm12920-201ENSMUST00000121818 1186 ntBASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Gm17097-201ENSMUST00000166414 714 ntBASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Mir3473c-201ENSMUST00000175262 81 ntBASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Trim11Q99PQ2 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms