Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Brf1Q8CFK2 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC8.1□□□□□ -1.11
Brf1Q8CFK2 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Gm38366-201ENSMUST00000193127 1934 ntBASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Gm44797-201ENSMUST00000208780 1837 ntBASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Gm13265-201ENSMUST00000118090 421 ntBASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Gm14631-201ENSMUST00000119067 594 ntBASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Gm13444-201ENSMUST00000119445 522 ntBASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Gm6027-201ENSMUST00000121467 756 ntBASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Gm4886-201ENSMUST00000121874 1176 ntBASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Gm7289-201ENSMUST00000168993 734 ntBASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Gm5456-201ENSMUST00000170706 844 ntBASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Gm20691-201ENSMUST00000176889 333 ntBASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Gm17045-201ENSMUST00000178600 844 ntBASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Gm27152-201ENSMUST00000183828 99 ntBASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Gm28846-201ENSMUST00000189161 368 ntBASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Gm4860-201ENSMUST00000200368 454 ntBASIC8.09□□□□□ -1.11
Brf1Q8CFK2 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Gm18012-201ENSMUST00000204558 773 ntBASIC8.09□□□□□ -1.11
Brf1Q8CFK2 AC110816.1-201ENSMUST00000218559 980 ntBASIC8.09□□□□□ -1.11
Brf1Q8CFK2 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Zmym2-202ENSMUST00000223669 1281 ntBASIC8.09□□□□□ -1.11
Brf1Q8CFK2 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 AC165260.4-201ENSMUST00000225924 724 ntBASIC8.09□□□□□ -1.11
Brf1Q8CFK2 AC156016.2-201ENSMUST00000228200 525 ntBASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Brf1Q8CFK2 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
Brf1Q8CFK2 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC8.09□□□□□ -1.12
Brf1Q8CFK2 Gm21846-201ENSMUST00000179257 3073 ntBASIC8.09□□□□□ -1.12
Brf1Q8CFK2 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Brf1Q8CFK2 Gm43187-201ENSMUST00000200652 2397 ntBASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 AC129085.2-201ENSMUST00000223763 2800 ntBASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Gm18359-201ENSMUST00000173024 1459 ntBASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Gm25093-201ENSMUST00000103993 132 ntBASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Gm26079-201ENSMUST00000104066 133 ntBASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Gm12778-201ENSMUST00000122341 333 ntBASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Gm23888-201ENSMUST00000122690 253 ntBASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Gm24781-201ENSMUST00000157636 117 ntBASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Gm9556-201ENSMUST00000182938 940 ntBASIC8.08□□□□□ -1.12
Brf1Q8CFK2 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Gm28929-201ENSMUST00000185330 1193 ntBASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Gm29197-201ENSMUST00000185922 702 ntBASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Igkv4-83-201ENSMUST00000196933 334 ntBASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 AC122327.2-201ENSMUST00000220883 120 ntBASIC8.08□□□□□ -1.12
Brf1Q8CFK2 AC122327.3-201ENSMUST00000221852 120 ntBASIC8.08□□□□□ -1.12
Brf1Q8CFK2 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 AC166341.1-201ENSMUST00000223360 105 ntBASIC8.08□□□□□ -1.12
Brf1Q8CFK2 AC091237.1-201ENSMUST00000224911 637 ntBASIC8.08□□□□□ -1.12
Brf1Q8CFK2 AC165106.1-201ENSMUST00000227580 408 ntBASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Brf1Q8CFK2 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms