Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 AU020206-202ENSMUST00000206358 3009 ntBASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Gm24519-201ENSMUST00000104507 132 ntBASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Gm11903-201ENSMUST00000118958 727 ntBASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Gm12727-201ENSMUST00000119885 359 ntBASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Gm26179-201ENSMUST00000177723 132 ntBASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Gm18709-201ENSMUST00000180564 489 ntBASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Gm29072-201ENSMUST00000191149 678 ntBASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 AC124489.1-201ENSMUST00000225852 526 ntBASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Gm26645-201ENSMUST00000181076 1316 ntBASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm10650-202ENSMUST00000196581 1969 ntBASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm10259-201ENSMUST00000091289 1590 ntBASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm26419-201ENSMUST00000104272 133 ntBASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm12874-201ENSMUST00000117190 913 ntBASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm15105-201ENSMUST00000117777 204 ntBASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm11926-201ENSMUST00000118520 430 ntBASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm15149-201ENSMUST00000119370 360 ntBASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm13207-201ENSMUST00000119862 773 ntBASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm14038-201ENSMUST00000121500 807 ntBASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Mir6241-201ENSMUST00000184225 103 ntBASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm8506-201ENSMUST00000186661 829 ntBASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm3121-201ENSMUST00000187086 406 ntBASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm22149-202ENSMUST00000196259 137 ntBASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm17849-201ENSMUST00000219788 853 ntBASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm8616-201ENSMUST00000222175 1037 ntBASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm21731-201ENSMUST00000079524 489 ntBASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm20775-201ENSMUST00000100115 1851 ntBASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm14849-201ENSMUST00000122293 2846 ntBASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ccdc28aQ8CEI3 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Gm22820-201ENSMUST00000157205 329 ntBASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Gm24176-201ENSMUST00000158928 121 ntBASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ccdc28aQ8CEI3 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms