Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Nup88Q8CEC0 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Nup88Q8CEC0 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Nup88Q8CEC0 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Nup88Q8CEC0 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC7.92□□□□□ -1.14
Nup88Q8CEC0 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Nup88Q8CEC0 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Nup88Q8CEC0 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC7.92□□□□□ -1.14
Nup88Q8CEC0 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC7.92□□□□□ -1.14
Nup88Q8CEC0 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Nup88Q8CEC0 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Gm43557-201ENSMUST00000197100 2370 ntBASIC7.91□□□□□ -1.14
Nup88Q8CEC0 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Gm37518-201ENSMUST00000194930 2603 ntBASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Gm22256-201ENSMUST00000102291 107 ntBASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Gm12939-201ENSMUST00000117303 165 ntBASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Gm15310-201ENSMUST00000117891 372 ntBASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Gm8312-201ENSMUST00000119380 618 ntBASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Gm12778-201ENSMUST00000122341 333 ntBASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Gm25395-201ENSMUST00000157343 272 ntBASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Gm17217-201ENSMUST00000166613 469 ntBASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Mir6989-201ENSMUST00000184812 65 ntBASIC7.91□□□□□ -1.14
Nup88Q8CEC0 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Gm37152-201ENSMUST00000193369 1175 ntBASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Trbv9-201ENSMUST00000194494 290 ntBASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Gm42708-201ENSMUST00000196332 905 ntBASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Gm3511-201ENSMUST00000199823 204 ntBASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Gm44411-201ENSMUST00000204172 349 ntBASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC7.91□□□□□ -1.14
Nup88Q8CEC0 AC154323.2-201ENSMUST00000226557 1151 ntBASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Gm29486-201ENSMUST00000088648 372 ntBASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Gm7731-201ENSMUST00000091759 470 ntBASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Gm14976-201ENSMUST00000117055 1394 ntBASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Gm9874-202ENSMUST00000194957 1464 ntBASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Gm18451-201ENSMUST00000196759 1719 ntBASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Nup88Q8CEC0 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 AL450321.1-201ENSMUST00000220600 3550 ntBASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Gm10555-201ENSMUST00000193178 1791 ntBASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Gm11972-201ENSMUST00000118514 389 ntBASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Apc-ps1-201ENSMUST00000119356 470 ntBASIC7.9□□□□□ -1.14
Nup88Q8CEC0 BC064078-201ENSMUST00000122939 570 ntBASIC7.9□□□□□ -1.14
Nup88Q8CEC0 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Gm27186-201ENSMUST00000184223 307 ntBASIC7.9□□□□□ -1.14
Nup88Q8CEC0 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Gm7351-201ENSMUST00000210745 580 ntBASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 AC131795.1-201ENSMUST00000219632 426 ntBASIC7.9□□□□□ -1.14
Nup88Q8CEC0 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Gm4808-201ENSMUST00000222283 1203 ntBASIC7.9□□□□□ -1.14
Nup88Q8CEC0 AC151730.1-201ENSMUST00000226106 448 ntBASIC7.9□□□□□ -1.14
Nup88Q8CEC0 AC123665.3-201ENSMUST00000228735 1216 ntBASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Gm45297-201ENSMUST00000209893 3483 ntBASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Nup88Q8CEC0 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC7.9□□□□□ -1.15
Nup88Q8CEC0 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
Nup88Q8CEC0 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
Nup88Q8CEC0 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms