Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Gm25311-201ENSMUST00000104136 132 ntBASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Gm26419-201ENSMUST00000104272 133 ntBASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Gm25724-201ENSMUST00000104531 117 ntBASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Gm6743-201ENSMUST00000117345 1066 ntBASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Gm13260-201ENSMUST00000117797 1264 ntBASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Gm6451-201ENSMUST00000121488 717 ntBASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Gm27014-201ENSMUST00000182658 937 ntBASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Gm28580-201ENSMUST00000186767 88 ntBASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Gm44213-201ENSMUST00000204977 703 ntBASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 AC159297.1-201ENSMUST00000218689 290 ntBASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Mir135a-1-201ENSMUST00000083473 90 ntBASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Ccdc38Q8CDN8 Gm45793-201ENSMUST00000207900 1342 ntBASIC7.52□□□□□ -1.2
Ccdc38Q8CDN8 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Ccdc38Q8CDN8 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
Ccdc38Q8CDN8 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Ccdc38Q8CDN8 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Ccdc38Q8CDN8 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.2
Ccdc38Q8CDN8 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm37076-201ENSMUST00000192033 2294 ntBASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm24284-201ENSMUST00000104240 142 ntBASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm24473-201ENSMUST00000104483 131 ntBASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm14865-201ENSMUST00000117523 494 ntBASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm14729-201ENSMUST00000118373 689 ntBASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm6726-201ENSMUST00000172786 681 ntBASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm20614-201ENSMUST00000177106 632 ntBASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm4308-201ENSMUST00000179735 914 ntBASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm27596-201ENSMUST00000185061 83 ntBASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm37383-201ENSMUST00000191750 745 ntBASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm19185-201ENSMUST00000196365 643 ntBASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm45122-201ENSMUST00000206376 784 ntBASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm7808-201ENSMUST00000082002 387 ntBASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm24451-201ENSMUST00000083353 133 ntBASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm10258-201ENSMUST00000091270 2123 ntBASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 AC174459.1-201ENSMUST00000224476 1943 ntBASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm16123-201ENSMUST00000118647 1517 ntBASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc38Q8CDN8 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Ccdc38Q8CDN8 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
Ccdc38Q8CDN8 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc38Q8CDN8 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc38Q8CDN8 Gm11972-201ENSMUST00000118514 389 ntBASIC7.51□□□□□ -1.21
Ccdc38Q8CDN8 Gm13679-201ENSMUST00000118678 484 ntBASIC7.51□□□□□ -1.21
Ccdc38Q8CDN8 Gm14584-201ENSMUST00000118956 637 ntBASIC7.51□□□□□ -1.21
Ccdc38Q8CDN8 Gm12630-201ENSMUST00000121575 784 ntBASIC7.51□□□□□ -1.21
Ccdc38Q8CDN8 Gm8577-201ENSMUST00000122420 986 ntBASIC7.51□□□□□ -1.21
Ccdc38Q8CDN8 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC7.51□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms