Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm13265-201ENSMUST00000118090 421 ntBASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Gm23674-201ENSMUST00000157473 131 ntBASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Gm25904-201ENSMUST00000158491 143 ntBASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Gm26557-201ENSMUST00000180756 493 ntBASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Gm29357-201ENSMUST00000186877 698 ntBASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Gm412-201ENSMUST00000193360 948 ntBASIC9.27□□□□□ -0.93
Usp40Q8BWR4 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC9.27□□□□□ -0.93
Usp40Q8BWR4 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Gm7554-201ENSMUST00000202282 574 ntBASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
Usp40Q8BWR4 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC9.27□□□□□ -0.93
Usp40Q8BWR4 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC9.27□□□□□ -0.93
Usp40Q8BWR4 AC134917.2-201ENSMUST00000223354 124 ntBASIC9.27□□□□□ -0.93
Usp40Q8BWR4 AC154441.1-201ENSMUST00000223653 1006 ntBASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Gm7731-201ENSMUST00000091759 470 ntBASIC9.27□□□□□ -0.93
Usp40Q8BWR4 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Gm14762-201ENSMUST00000105109 1771 ntBASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Usp40Q8BWR4 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Usp40Q8BWR4 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usp40Q8BWR4 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Gm24272-201ENSMUST00000102329 98 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Gm13033-201ENSMUST00000117591 1057 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Gm7113-201ENSMUST00000120477 958 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Gm8648-201ENSMUST00000122457 221 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Gm23903-201ENSMUST00000157566 131 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Rps12l1-201ENSMUST00000183090 399 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Gm28586-201ENSMUST00000189857 456 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Gm18849-201ENSMUST00000189861 560 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Gm37517-201ENSMUST00000194004 1289 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 AC122327.2-201ENSMUST00000220883 120 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 AC122327.3-201ENSMUST00000221852 120 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 AC166341.1-201ENSMUST00000223360 105 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 AC131187.2-201ENSMUST00000223936 994 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 AC154730.1-201ENSMUST00000227874 816 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Gm45073-201ENSMUST00000207688 4247 ntBASIC9.26□□□□□ -0.93
Usp40Q8BWR4 Gm37525-201ENSMUST00000193499 2871 ntBASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms