Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Usp54Q8BL06 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Usp54Q8BL06 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Usp54Q8BL06 Gm38009-201ENSMUST00000194884 3341 ntBASIC9.42□□□□□ -0.9
Usp54Q8BL06 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Gm26067-201ENSMUST00000103789 110 ntBASIC9.41□□□□□ -0.9
Usp54Q8BL06 Gm6918-201ENSMUST00000167622 1222 ntBASIC9.41□□□□□ -0.9
Usp54Q8BL06 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Gm17997-201ENSMUST00000211801 840 ntBASIC9.41□□□□□ -0.9
Usp54Q8BL06 Gm4510-201ENSMUST00000218265 427 ntBASIC9.41□□□□□ -0.9
Usp54Q8BL06 AC105950.1-201ENSMUST00000222637 408 ntBASIC9.41□□□□□ -0.9
Usp54Q8BL06 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Ablim1-207ENSMUST00000111529 5927 ntTSL 5 BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp54Q8BL06 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC9.41□□□□□ -0.9
Usp54Q8BL06 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Usp54Q8BL06 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Gm10513-201ENSMUST00000194203 6468 ntBASIC9.41□□□□□ -0.9
Usp54Q8BL06 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Gm45537-201ENSMUST00000211539 2708 ntBASIC9.41□□□□□ -0.9
Usp54Q8BL06 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Gm16074-201ENSMUST00000119524 444 ntBASIC9.41□□□□□ -0.9
Usp54Q8BL06 Gm13222-201ENSMUST00000119638 138 ntBASIC9.41□□□□□ -0.9
Usp54Q8BL06 Gm7152-201ENSMUST00000163570 605 ntBASIC9.41□□□□□ -0.9
Usp54Q8BL06 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC9.41□□□□□ -0.9
Usp54Q8BL06 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC9.41□□□□□ -0.9
Usp54Q8BL06 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC9.41□□□□□ -0.9
Usp54Q8BL06 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC9.41□□□□□ -0.9
Usp54Q8BL06 Gm2539-203ENSMUST00000181352 746 ntBASIC9.41□□□□□ -0.9
Usp54Q8BL06 Gm20926-201ENSMUST00000194457 696 ntBASIC9.41□□□□□ -0.9
Usp54Q8BL06 AC157822.1-201ENSMUST00000196643 80 ntBASIC9.41□□□□□ -0.9
Usp54Q8BL06 AC159979.1-201ENSMUST00000227927 342 ntBASIC9.41□□□□□ -0.9
Usp54Q8BL06 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Olfr157-201ENSMUST00000214281 6617 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp54Q8BL06 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp54Q8BL06 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC9.4□□□□□ -0.9
Usp54Q8BL06 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp54Q8BL06 Gm37906-201ENSMUST00000192050 3035 ntBASIC9.4□□□□□ -0.9
Usp54Q8BL06 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp54Q8BL06 AC135119.1-202ENSMUST00000228435 2203 ntBASIC9.4□□□□□ -0.9
Usp54Q8BL06 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Usp54Q8BL06 Gm18796-201ENSMUST00000190440 1767 ntBASIC9.4□□□□□ -0.9
Usp54Q8BL06 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Usp54Q8BL06 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp54Q8BL06 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp54Q8BL06 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp54Q8BL06 4932431P20Rik-202ENSMUST00000141713 9288 ntBASIC9.4□□□□□ -0.9
Usp54Q8BL06 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp54Q8BL06 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usp54Q8BL06 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usp54Q8BL06 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp54Q8BL06 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp54Q8BL06 Gm13416-201ENSMUST00000117264 1612 ntBASIC9.4□□□□□ -0.9
Usp54Q8BL06 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp54Q8BL06 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp54Q8BL06 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Usp54Q8BL06 Gm36527-201ENSMUST00000195500 3029 ntBASIC9.4□□□□□ -0.9
Usp54Q8BL06 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp54Q8BL06 AC135119.1-204ENSMUST00000228036 2663 ntBASIC9.4□□□□□ -0.9
Usp54Q8BL06 Mir700-201ENSMUST00000102169 79 ntBASIC9.4□□□□□ -0.9
Usp54Q8BL06 Gm15016-201ENSMUST00000117300 720 ntBASIC9.4□□□□□ -0.9
Usp54Q8BL06 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC9.4□□□□□ -0.9
Usp54Q8BL06 Gm12400-201ENSMUST00000120915 1003 ntBASIC9.4□□□□□ -0.9
Usp54Q8BL06 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC9.4□□□□□ -0.9
Usp54Q8BL06 Gm43098-201ENSMUST00000199989 1297 ntBASIC9.4□□□□□ -0.9
Usp54Q8BL06 Gm43235-201ENSMUST00000200121 297 ntBASIC9.4□□□□□ -0.9
Usp54Q8BL06 Gm2225-201ENSMUST00000209570 377 ntBASIC9.4□□□□□ -0.9
Usp54Q8BL06 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC9.4□□□□□ -0.9
Usp54Q8BL06 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC9.4□□□□□ -0.9
Usp54Q8BL06 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC9.4□□□□□ -0.9
Usp54Q8BL06 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC9.4□□□□□ -0.9
Usp54Q8BL06 AC127242.4-201ENSMUST00000221242 470 ntBASIC9.4□□□□□ -0.9
Usp54Q8BL06 AC154633.1-201ENSMUST00000223276 449 ntBASIC9.4□□□□□ -0.9
Usp54Q8BL06 Gm37864-201ENSMUST00000195308 3075 ntBASIC9.4□□□□□ -0.9
Usp54Q8BL06 Gm10862-201ENSMUST00000193956 3350 ntBASIC9.4□□□□□ -0.9
Usp54Q8BL06 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
Usp54Q8BL06 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Usp54Q8BL06 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Usp54Q8BL06 Gm43864-201ENSMUST00000204452 4028 ntBASIC9.4□□□□□ -0.91
Usp54Q8BL06 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Usp54Q8BL06 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms