Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC7.08□□□□□ -1.28
Ccdc40Q8BI79 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC7.08□□□□□ -1.28
Ccdc40Q8BI79 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC7.08□□□□□ -1.28
Ccdc40Q8BI79 Gm5080-201ENSMUST00000220341 743 ntBASIC7.08□□□□□ -1.28
Ccdc40Q8BI79 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc40Q8BI79 Gm10540-201ENSMUST00000097581 276 ntBASIC7.08□□□□□ -1.28
Ccdc40Q8BI79 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC7.08□□□□□ -1.28
Ccdc40Q8BI79 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Ccdc40Q8BI79 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc40Q8BI79 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Ccdc40Q8BI79 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc40Q8BI79 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc40Q8BI79 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC7.08□□□□□ -1.28
Ccdc40Q8BI79 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc40Q8BI79 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc40Q8BI79 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Gm43611-201ENSMUST00000196656 4352 ntBASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Gm10307-201ENSMUST00000189839 1337 ntBASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Gm45793-201ENSMUST00000207900 1342 ntBASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 AC107452.3-201ENSMUST00000228807 1308 ntBASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Gm37056-201ENSMUST00000192141 1865 ntBASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Gm22774-201ENSMUST00000102084 109 ntBASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Gm25631-201ENSMUST00000104390 130 ntBASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Gm12903-201ENSMUST00000121015 544 ntBASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 n-R5s48-201ENSMUST00000122482 110 ntBASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Gm25969-201ENSMUST00000157166 132 ntBASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Gm24286-201ENSMUST00000157632 128 ntBASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Mir1930-201ENSMUST00000158799 84 ntBASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Gm8550-201ENSMUST00000161621 653 ntBASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Gm7412-201ENSMUST00000191692 605 ntBASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Gm43595-201ENSMUST00000196464 1071 ntBASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Gm9710-201ENSMUST00000198053 499 ntBASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Gm2221-201ENSMUST00000209342 418 ntBASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Gm32899-201ENSMUST00000219694 207 ntBASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Gm19238-201ENSMUST00000221936 1260 ntBASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Gm2080-201ENSMUST00000211299 1573 ntBASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Gm10259-201ENSMUST00000091289 1590 ntBASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc40Q8BI79 Gm5512-202ENSMUST00000220222 1522 ntBASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 AC158981.2-201ENSMUST00000227565 1537 ntBASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Gm29761-201ENSMUST00000215964 1939 ntBASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Gm25379-201ENSMUST00000104338 114 ntBASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Gm12635-201ENSMUST00000117285 752 ntBASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Gm13900-201ENSMUST00000119402 498 ntBASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Gm26183-201ENSMUST00000157685 139 ntBASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Gm28443-201ENSMUST00000189081 698 ntBASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Gm42804-201ENSMUST00000199701 178 ntBASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 AC127242.3-201ENSMUST00000222009 580 ntBASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 AC165157.1-201ENSMUST00000222981 580 ntBASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 n-R5s156-201ENSMUST00000083377 105 ntBASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 AC022682.2-202ENSMUST00000224394 3943 ntBASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc40Q8BI79 AC138765.2-202ENSMUST00000228418 3435 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 135.3 ms