Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Gm11504-201ENSMUST00000120211 173 ntBASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Gm20615-201ENSMUST00000177503 705 ntBASIC6.26□□□□□ -1.41
Spg11Q3UHA3 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Gm37295-201ENSMUST00000192186 109 ntBASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Gm17824-201ENSMUST00000197690 805 ntBASIC6.26□□□□□ -1.41
Spg11Q3UHA3 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Mgat4a-201ENSMUST00000042161 7030 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Gm44117-201ENSMUST00000204442 1758 ntBASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Gm6313-202ENSMUST00000150112 2562 ntTSL 2 BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Slc5a6-201ENSMUST00000080431 3218 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Ambn-201ENSMUST00000031226 1854 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Gm27034-201ENSMUST00000182552 940 ntBASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Gm23011-202ENSMUST00000197855 275 ntBASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Gm18422-201ENSMUST00000203663 1032 ntBASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 A630001O12Rik-201ENSMUST00000212914 2182 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 AC163684.1-201ENSMUST00000223766 927 ntBASIC6.26□□□□□ -1.41
Spg11Q3UHA3 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Gm15732-201ENSMUST00000079794 480 ntBASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Mir218-2-201ENSMUST00000083649 110 ntBASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Wdr76-202ENSMUST00000099473 2315 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Gm17575-201ENSMUST00000180437 1991 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Arhgef3-201ENSMUST00000049206 3585 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC6.26□□□□□ -1.41
Spg11Q3UHA3 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm14373-201ENSMUST00000122467 2158 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm2654-201ENSMUST00000221381 1592 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm22895-201ENSMUST00000157508 308 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Mir1970-201ENSMUST00000157839 104 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm8192-201ENSMUST00000182196 958 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm26950-201ENSMUST00000182734 498 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm28943-201ENSMUST00000186187 615 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm28736-201ENSMUST00000186257 615 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm29401-201ENSMUST00000186690 615 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm29178-204ENSMUST00000186784 615 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm28589-201ENSMUST00000186991 615 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm28936-201ENSMUST00000187153 615 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm29121-201ENSMUST00000187611 615 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm28243-201ENSMUST00000187801 615 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm28844-202ENSMUST00000187977 615 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm28976-201ENSMUST00000188070 144 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm29058-201ENSMUST00000189510 615 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm29624-201ENSMUST00000190018 615 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm28780-201ENSMUST00000190223 615 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm28969-211ENSMUST00000190992 615 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm28990-207ENSMUST00000191219 615 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm36468-201ENSMUST00000192119 615 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm31572-201ENSMUST00000193341 615 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm30175-201ENSMUST00000194173 615 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm30858-201ENSMUST00000195516 615 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Spg11Q3UHA3 Gm6477-201ENSMUST00000217098 764 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 AC154646.1-201ENSMUST00000225011 1092 ntBASIC6.25□□□□□ -1.41
Spg11Q3UHA3 AC122858.1-201ENSMUST00000226212 433 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms