Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Msh6P54276 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Msh6P54276 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Msh6P54276 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Msh6P54276 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Msh6P54276 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Msh6P54276 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Msh6P54276 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Msh6P54276 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Msh6P54276 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC8.57□□□□□ -1.04
Msh6P54276 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
Msh6P54276 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC8.57□□□□□ -1.04
Msh6P54276 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC8.57□□□□□ -1.04
Msh6P54276 Gm23674-201ENSMUST00000157473 131 ntBASIC8.57□□□□□ -1.04
Msh6P54276 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Msh6P54276 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC8.57□□□□□ -1.04
Msh6P54276 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC8.57□□□□□ -1.04
Msh6P54276 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC8.57□□□□□ -1.04
Msh6P54276 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Msh6P54276 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC8.57□□□□□ -1.04
Msh6P54276 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Msh6P54276 Gm37493-201ENSMUST00000193167 433 ntBASIC8.57□□□□□ -1.04
Msh6P54276 Igkv4-83-201ENSMUST00000196933 334 ntBASIC8.57□□□□□ -1.04
Msh6P54276 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC8.57□□□□□ -1.04
Msh6P54276 Gm44809-201ENSMUST00000208305 993 ntBASIC8.57□□□□□ -1.04
Msh6P54276 Gm22053-201ENSMUST00000083394 200 ntBASIC8.57□□□□□ -1.04
Msh6P54276 Gm10221-201ENSMUST00000088299 309 ntBASIC8.57□□□□□ -1.04
Msh6P54276 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Msh6P54276 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Msh6P54276 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
Msh6P54276 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Msh6P54276 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC8.57□□□□□ -1.04
Msh6P54276 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Msh6P54276 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
Msh6P54276 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Msh6P54276 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC8.56□□□□□ -1.04
Msh6P54276 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Msh6P54276 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Msh6P54276 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Msh6P54276 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC8.56□□□□□ -1.04
Msh6P54276 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
Msh6P54276 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Msh6P54276 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Msh6P54276 Gm25346-201ENSMUST00000104509 128 ntBASIC8.56□□□□□ -1.04
Msh6P54276 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Msh6P54276 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Msh6P54276 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC8.56□□□□□ -1.04
Msh6P54276 Gm26162-201ENSMUST00000157793 132 ntBASIC8.56□□□□□ -1.04
Msh6P54276 Gm25550-201ENSMUST00000158079 128 ntBASIC8.56□□□□□ -1.04
Msh6P54276 Gm25246-201ENSMUST00000175476 69 ntBASIC8.56□□□□□ -1.04
Msh6P54276 Mir7653-201ENSMUST00000184358 61 ntBASIC8.56□□□□□ -1.04
Msh6P54276 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC8.56□□□□□ -1.04
Msh6P54276 Gm43392-201ENSMUST00000196560 434 ntBASIC8.56□□□□□ -1.04
Msh6P54276 Gm7492-201ENSMUST00000201745 725 ntBASIC8.56□□□□□ -1.04
Msh6P54276 Gm5324-201ENSMUST00000208115 476 ntBASIC8.56□□□□□ -1.04
Msh6P54276 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC8.56□□□□□ -1.04
Msh6P54276 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC8.56□□□□□ -1.04
Msh6P54276 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Msh6P54276 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Msh6P54276 Olfr519-201ENSMUST00000084752 960 ntBASIC8.56□□□□□ -1.04
Msh6P54276 Gm7731-201ENSMUST00000091759 470 ntBASIC8.56□□□□□ -1.04
Msh6P54276 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Msh6P54276 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Msh6P54276 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Msh6P54276 Gm43181-201ENSMUST00000197001 2072 ntBASIC8.56□□□□□ -1.04
Msh6P54276 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Msh6P54276 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Msh6P54276 AC139750.1-201ENSMUST00000223962 1300 ntBASIC8.56□□□□□ -1.04
Msh6P54276 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Msh6P54276 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC8.56□□□□□ -1.04
Msh6P54276 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Msh6P54276 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Msh6P54276 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Msh6P54276 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC8.55□□□□□ -1.04
Msh6P54276 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC8.55□□□□□ -1.04
Msh6P54276 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Msh6P54276 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Msh6P54276 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Msh6P54276 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Msh6P54276 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Msh6P54276 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Msh6P54276 Gm26079-201ENSMUST00000104066 133 ntBASIC8.55□□□□□ -1.04
Msh6P54276 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC8.55□□□□□ -1.04
Msh6P54276 Gm14712-201ENSMUST00000120195 772 ntBASIC8.55□□□□□ -1.04
Msh6P54276 Gm14695-201ENSMUST00000121721 282 ntBASIC8.55□□□□□ -1.04
Msh6P54276 Gm22342-201ENSMUST00000122647 298 ntBASIC8.55□□□□□ -1.04
Msh6P54276 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Msh6P54276 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC8.55□□□□□ -1.04
Msh6P54276 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC8.55□□□□□ -1.04
Msh6P54276 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC8.55□□□□□ -1.04
Msh6P54276 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC8.55□□□□□ -1.04
Msh6P54276 Gm22701-201ENSMUST00000175371 291 ntBASIC8.55□□□□□ -1.04
Msh6P54276 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC8.55□□□□□ -1.04
Msh6P54276 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC8.55□□□□□ -1.04
Msh6P54276 Gm27005-201ENSMUST00000182783 921 ntBASIC8.55□□□□□ -1.04
Msh6P54276 Mir7235-201ENSMUST00000183796 56 ntBASIC8.55□□□□□ -1.04
Msh6P54276 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Msh6P54276 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC8.55□□□□□ -1.04
Msh6P54276 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC8.55□□□□□ -1.04
Msh6P54276 Gm44111-201ENSMUST00000204649 399 ntBASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms