Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm12632-201ENSMUST00000121223 495 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Gm12807-201ENSMUST00000121546 962 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Gm9001-201ENSMUST00000121642 399 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Gm25178-201ENSMUST00000122633 325 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Gm23740-201ENSMUST00000157385 100 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Gm23220-201ENSMUST00000158115 137 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Gm16027-201ENSMUST00000161618 758 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Bud31-207ENSMUST00000162594 867 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
Rfx1P48377 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Rfx1P48377 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Rfx1P48377 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Rfx1P48377 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rfx1P48377 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Rfx1P48377 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Rfx1P48377 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Rfx1P48377 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Rfx1P48377 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Rfx1P48377 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC8.6□□□□□ -1.03
Rfx1P48377 Mir8099-2-201ENSMUST00000183568 127 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Mir8099-1-201ENSMUST00000184238 127 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC8.6□□□□□ -1.03
Rfx1P48377 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rfx1P48377 Gm37000-201ENSMUST00000193058 428 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Gm37328-201ENSMUST00000193191 640 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC8.6□□□□□ -1.03
Rfx1P48377 Gm44003-201ENSMUST00000203024 490 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Olfr214-202ENSMUST00000203867 1255 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
Rfx1P48377 Gm38840-201ENSMUST00000204716 843 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Gm18268-201ENSMUST00000208445 943 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Gm44982-201ENSMUST00000208795 471 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rfx1P48377 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC8.6□□□□□ -1.03
Rfx1P48377 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC8.6□□□□□ -1.03
Rfx1P48377 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC8.6□□□□□ -1.03
Rfx1P48377 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rfx1P48377 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rfx1P48377 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Rfx1P48377 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rfx1P48377 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
Rfx1P48377 Gm4825-201ENSMUST00000079690 408 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Rfx1P48377 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rfx1P48377 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rfx1P48377 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rfx1P48377 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Rfx1P48377 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rfx1P48377 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
Rfx1P48377 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rfx1P48377 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rfx1P48377 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rfx1P48377 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rfx1P48377 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rfx1P48377 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rfx1P48377 AC154747.4-203ENSMUST00000225893 1384 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rfx1P48377 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rfx1P48377 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rfx1P48377 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rfx1P48377 AC163660.4-201ENSMUST00000224983 2171 ntBASIC8.59□□□□□ -1.03
Rfx1P48377 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Rfx1P48377 Gm20768-201ENSMUST00000199527 2338 ntBASIC8.59□□□□□ -1.03
Rfx1P48377 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rfx1P48377 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rfx1P48377 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rfx1P48377 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rfx1P48377 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rfx1P48377 Gm42595-201ENSMUST00000196771 1607 ntBASIC8.59□□□□□ -1.03
Rfx1P48377 Gm43128-201ENSMUST00000202212 1621 ntBASIC8.59□□□□□ -1.03
Rfx1P48377 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Rfx1P48377 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Rfx1P48377 Gm14931-201ENSMUST00000111079 253 ntBASIC8.59□□□□□ -1.03
Rfx1P48377 Gm14098-201ENSMUST00000119295 623 ntBASIC8.59□□□□□ -1.03
Rfx1P48377 Gm12817-201ENSMUST00000119622 610 ntBASIC8.59□□□□□ -1.03
Rfx1P48377 Gm11850-201ENSMUST00000119679 479 ntBASIC8.59□□□□□ -1.03
Rfx1P48377 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC8.59□□□□□ -1.03
Rfx1P48377 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC8.59□□□□□ -1.03
Rfx1P48377 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rfx1P48377 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC8.59□□□□□ -1.03
Rfx1P48377 Gm5611-201ENSMUST00000164523 852 ntBASIC8.59□□□□□ -1.03
Rfx1P48377 Gm4781-201ENSMUST00000167995 781 ntBASIC8.59□□□□□ -1.03
Rfx1P48377 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC8.59□□□□□ -1.03
Rfx1P48377 Gm22698-201ENSMUST00000175375 108 ntBASIC8.59□□□□□ -1.03
Rfx1P48377 Gm37339-201ENSMUST00000194142 392 ntBASIC8.59□□□□□ -1.03
Rfx1P48377 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC8.59□□□□□ -1.03
Rfx1P48377 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC8.59□□□□□ -1.03
Rfx1P48377 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC8.59□□□□□ -1.03
Rfx1P48377 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC8.59□□□□□ -1.03
Rfx1P48377 Gm18562-201ENSMUST00000209949 915 ntBASIC8.59□□□□□ -1.03
Rfx1P48377 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC8.59□□□□□ -1.03
Rfx1P48377 Olfr664-202ENSMUST00000211596 921 ntAPPRIS ALT2 BASIC8.59□□□□□ -1.03
Rfx1P48377 Gm46103-201ENSMUST00000217614 341 ntBASIC8.59□□□□□ -1.03
Rfx1P48377 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rfx1P48377 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC8.59□□□□□ -1.03
Rfx1P48377 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rfx1P48377 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Rfx1P48377 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Rfx1P48377 Gm44667-201ENSMUST00000207632 3337 ntBASIC8.59□□□□□ -1.03
Rfx1P48377 AC166574.5-201ENSMUST00000227438 1432 ntBASIC8.59□□□□□ -1.03
Rfx1P48377 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms