Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
Cdx2P43241 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cdx2P43241 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Cdx2P43241 AC166574.1-201ENSMUST00000226916 1309 ntBASIC6.47□□□□□ -1.37
Cdx2P43241 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cdx2P43241 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cdx2P43241 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Cdx2P43241 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Cdx2P43241 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Cdx2P43241 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Cdx2P43241 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
Cdx2P43241 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Cdx2P43241 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Cdx2P43241 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Cdx2P43241 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC6.46□□□□□ -1.37
Cdx2P43241 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Cdx2P43241 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
Cdx2P43241 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx2P43241 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC6.46□□□□□ -1.38
Cdx2P43241 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx2P43241 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx2P43241 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
Cdx2P43241 Gm22370-201ENSMUST00000102422 83 ntBASIC6.46□□□□□ -1.38
Cdx2P43241 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Cdx2P43241 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx2P43241 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx2P43241 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx2P43241 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx2P43241 Gm9005-201ENSMUST00000119908 607 ntBASIC6.46□□□□□ -1.38
Cdx2P43241 Gm7113-201ENSMUST00000120477 958 ntBASIC6.46□□□□□ -1.38
Cdx2P43241 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.46□□□□□ -1.38
Cdx2P43241 Gm25219-201ENSMUST00000157545 330 ntBASIC6.46□□□□□ -1.38
Cdx2P43241 Gm26410-201ENSMUST00000157670 261 ntBASIC6.46□□□□□ -1.38
Cdx2P43241 Gm24687-201ENSMUST00000157758 241 ntBASIC6.46□□□□□ -1.38
Cdx2P43241 Gm25717-201ENSMUST00000158631 353 ntBASIC6.46□□□□□ -1.38
Cdx2P43241 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.46□□□□□ -1.38
Cdx2P43241 Mir5110-201ENSMUST00000175537 87 ntBASIC6.46□□□□□ -1.38
Cdx2P43241 Gm27152-201ENSMUST00000183828 99 ntBASIC6.46□□□□□ -1.38
Cdx2P43241 Gm28527-201ENSMUST00000185210 297 ntBASIC6.46□□□□□ -1.38
Cdx2P43241 Gm36933-201ENSMUST00000194945 3071 ntBASIC6.46□□□□□ -1.38
Cdx2P43241 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.46□□□□□ -1.38
Cdx2P43241 Gm18009-201ENSMUST00000203239 1016 ntBASIC6.46□□□□□ -1.38
Cdx2P43241 Gm44178-201ENSMUST00000205229 2930 ntBASIC6.46□□□□□ -1.38
Cdx2P43241 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC6.46□□□□□ -1.38
Cdx2P43241 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC6.46□□□□□ -1.38
Cdx2P43241 Gm4803-201ENSMUST00000218729 1279 ntBASIC6.46□□□□□ -1.38
Cdx2P43241 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Cdx2P43241 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Cdx2P43241 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx2P43241 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC6.46□□□□□ -1.38
Cdx2P43241 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx2P43241 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC6.46□□□□□ -1.38
Cdx2P43241 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx2P43241 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx2P43241 Gm45112-201ENSMUST00000208576 5125 ntBASIC6.46□□□□□ -1.38
Cdx2P43241 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Cdx2P43241 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
Cdx2P43241 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx2P43241 AC105407.2-205ENSMUST00000224680 2733 ntBASIC6.46□□□□□ -1.38
Cdx2P43241 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx2P43241 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx2P43241 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx2P43241 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Cdx2P43241 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx2P43241 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx2P43241 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Cdx2P43241 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC6.45□□□□□ -1.38
Cdx2P43241 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Cdx2P43241 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
Cdx2P43241 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Cdx2P43241 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx2P43241 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx2P43241 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Cdx2P43241 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx2P43241 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Cdx2P43241 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC6.45□□□□□ -1.38
Cdx2P43241 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx2P43241 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx2P43241 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC6.45□□□□□ -1.38
Cdx2P43241 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx2P43241 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx2P43241 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Cdx2P43241 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx2P43241 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Cdx2P43241 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx2P43241 Gm13352-201ENSMUST00000117515 262 ntBASIC6.45□□□□□ -1.38
Cdx2P43241 Gm14613-201ENSMUST00000122239 752 ntBASIC6.45□□□□□ -1.38
Cdx2P43241 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC6.45□□□□□ -1.38
Cdx2P43241 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Cdx2P43241 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC6.45□□□□□ -1.38
Cdx2P43241 Gm17048-201ENSMUST00000179266 847 ntBASIC6.45□□□□□ -1.38
Cdx2P43241 Gm6931-201ENSMUST00000183103 371 ntBASIC6.45□□□□□ -1.38
Cdx2P43241 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
Cdx2P43241 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC6.45□□□□□ -1.38
Cdx2P43241 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC6.45□□□□□ -1.38
Cdx2P43241 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx2P43241 Gm9315-201ENSMUST00000222696 908 ntBASIC6.45□□□□□ -1.38
Cdx2P43241 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Cdx2P43241 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx2P43241 Gm6436-201ENSMUST00000077163 451 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms