Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm23734-201ENSMUST00000083753 109 ntBASIC6.28□□□□□ -1.4
Sox6P40645 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox6P40645 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Sox6P40645 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.28□□□□□ -1.4
Sox6P40645 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox6P40645 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sox6P40645 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Sox6P40645 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.28□□□□□ -1.4
Sox6P40645 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox6P40645 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Sox6P40645 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.28□□□□□ -1.4
Sox6P40645 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sox6P40645 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.28□□□□□ -1.4
Sox6P40645 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Sox6P40645 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.4
Sox6P40645 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Sox6P40645 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Sox6P40645 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Sox6P40645 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Sox6P40645 Gm14904-201ENSMUST00000117067 335 ntBASIC6.27□□□□□ -1.41
Sox6P40645 Gm14893-201ENSMUST00000117904 282 ntBASIC6.27□□□□□ -1.41
Sox6P40645 Gm16044-201ENSMUST00000118475 450 ntBASIC6.27□□□□□ -1.41
Sox6P40645 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 Gm14728-201ENSMUST00000122196 492 ntBASIC6.27□□□□□ -1.41
Sox6P40645 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC6.27□□□□□ -1.41
Sox6P40645 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC6.27□□□□□ -1.41
Sox6P40645 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 Gm23077-201ENSMUST00000157854 116 ntBASIC6.27□□□□□ -1.41
Sox6P40645 Mir1930-201ENSMUST00000158799 84 ntBASIC6.27□□□□□ -1.41
Sox6P40645 Gm24228-201ENSMUST00000158829 129 ntBASIC6.27□□□□□ -1.41
Sox6P40645 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Sox6P40645 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Sox6P40645 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC6.27□□□□□ -1.41
Sox6P40645 Gm28413-201ENSMUST00000189369 291 ntBASIC6.27□□□□□ -1.41
Sox6P40645 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC6.27□□□□□ -1.41
Sox6P40645 Gm36932-201ENSMUST00000195226 929 ntBASIC6.27□□□□□ -1.41
Sox6P40645 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 Gm44213-201ENSMUST00000204977 703 ntBASIC6.27□□□□□ -1.41
Sox6P40645 Gm45042-201ENSMUST00000207377 211 ntBASIC6.27□□□□□ -1.41
Sox6P40645 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC6.27□□□□□ -1.41
Sox6P40645 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.27□□□□□ -1.41
Sox6P40645 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC6.27□□□□□ -1.41
Sox6P40645 AC121542.2-201ENSMUST00000227529 400 ntBASIC6.27□□□□□ -1.41
Sox6P40645 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
Sox6P40645 Gm24451-201ENSMUST00000083353 133 ntBASIC6.27□□□□□ -1.41
Sox6P40645 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.27□□□□□ -1.41
Sox6P40645 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
Sox6P40645 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.27□□□□□ -1.41
Sox6P40645 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.27□□□□□ -1.41
Sox6P40645 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sox6P40645 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
Sox6P40645 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sox6P40645 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sox6P40645 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sox6P40645 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sox6P40645 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sox6P40645 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Sox6P40645 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sox6P40645 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sox6P40645 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sox6P40645 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.26□□□□□ -1.41
Sox6P40645 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
Sox6P40645 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Sox6P40645 Gm22774-201ENSMUST00000102084 109 ntBASIC6.26□□□□□ -1.41
Sox6P40645 Mir708-201ENSMUST00000102189 109 ntBASIC6.26□□□□□ -1.41
Sox6P40645 Gm25379-201ENSMUST00000104338 114 ntBASIC6.26□□□□□ -1.41
Sox6P40645 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Sox6P40645 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC6.26□□□□□ -1.41
Sox6P40645 Gm11864-201ENSMUST00000116179 1220 ntBASIC6.26□□□□□ -1.41
Sox6P40645 Gm11338-201ENSMUST00000120086 1160 ntBASIC6.26□□□□□ -1.41
Sox6P40645 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sox6P40645 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.26□□□□□ -1.41
Sox6P40645 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sox6P40645 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Sox6P40645 Gm17022-201ENSMUST00000166415 922 ntBASIC6.26□□□□□ -1.41
Sox6P40645 Mir6769b-201ENSMUST00000184793 60 ntBASIC6.26□□□□□ -1.41
Sox6P40645 Mir8120-201ENSMUST00000185035 139 ntBASIC6.26□□□□□ -1.41
Sox6P40645 Gm28958-201ENSMUST00000185864 703 ntBASIC6.26□□□□□ -1.41
Sox6P40645 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms