Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Traf1P39428 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Traf1P39428 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Traf1P39428 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Traf1P39428 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
Traf1P39428 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Traf1P39428 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC7.93□□□□□ -1.14
Traf1P39428 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Traf1P39428 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Traf1P39428 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Traf1P39428 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Traf1P39428 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC7.93□□□□□ -1.14
Traf1P39428 CT025675.1-201ENSMUST00000228171 1567 ntBASIC7.93□□□□□ -1.14
Traf1P39428 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
Traf1P39428 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Traf1P39428 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Traf1P39428 Gm36981-201ENSMUST00000192340 4485 ntBASIC7.92□□□□□ -1.14
Traf1P39428 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Traf1P39428 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Traf1P39428 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Traf1P39428 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC7.92□□□□□ -1.14
Traf1P39428 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Traf1P39428 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Traf1P39428 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Traf1P39428 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC7.92□□□□□ -1.14
Traf1P39428 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC7.92□□□□□ -1.14
Traf1P39428 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC7.92□□□□□ -1.14
Traf1P39428 Gm23945-201ENSMUST00000179609 92 ntBASIC7.92□□□□□ -1.14
Traf1P39428 Gm27158-201ENSMUST00000183813 238 ntBASIC7.92□□□□□ -1.14
Traf1P39428 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Traf1P39428 Gm42443-201ENSMUST00000198084 1155 ntBASIC7.92□□□□□ -1.14
Traf1P39428 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC7.92□□□□□ -1.14
Traf1P39428 Gm43141-201ENSMUST00000199695 274 ntBASIC7.92□□□□□ -1.14
Traf1P39428 Gm7452-201ENSMUST00000200764 788 ntBASIC7.92□□□□□ -1.14
Traf1P39428 Gm17834-201ENSMUST00000204322 891 ntBASIC7.92□□□□□ -1.14
Traf1P39428 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC7.92□□□□□ -1.14
Traf1P39428 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC7.92□□□□□ -1.14
Traf1P39428 Gm45693-201ENSMUST00000211391 1157 ntBASIC7.92□□□□□ -1.14
Traf1P39428 Gm17849-201ENSMUST00000219788 853 ntBASIC7.92□□□□□ -1.14
Traf1P39428 CT009754.4-201ENSMUST00000221430 565 ntBASIC7.92□□□□□ -1.14
Traf1P39428 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Traf1P39428 Gm36527-201ENSMUST00000195500 3029 ntBASIC7.92□□□□□ -1.14
Traf1P39428 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC7.92□□□□□ -1.14
Traf1P39428 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Traf1P39428 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Traf1P39428 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC7.92□□□□□ -1.14
Traf1P39428 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Traf1P39428 Gm5361-201ENSMUST00000211041 1498 ntBASIC7.92□□□□□ -1.14
Traf1P39428 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC7.92□□□□□ -1.14
Traf1P39428 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Traf1P39428 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC7.92□□□□□ -1.14
Traf1P39428 Gm28379-202ENSMUST00000187676 2896 ntBASIC7.92□□□□□ -1.14
Traf1P39428 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Traf1P39428 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Traf1P39428 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC7.92□□□□□ -1.14
Traf1P39428 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Traf1P39428 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Traf1P39428 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
Traf1P39428 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Traf1P39428 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Traf1P39428 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Traf1P39428 Gm13006-201ENSMUST00000118683 214 ntBASIC7.91□□□□□ -1.14
Traf1P39428 Gm6654-201ENSMUST00000118950 348 ntBASIC7.91□□□□□ -1.14
Traf1P39428 Gm15311-201ENSMUST00000119682 282 ntBASIC7.91□□□□□ -1.14
Traf1P39428 Gm15305-201ENSMUST00000120354 288 ntBASIC7.91□□□□□ -1.14
Traf1P39428 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC7.91□□□□□ -1.14
Traf1P39428 Gm11370-201ENSMUST00000120583 260 ntBASIC7.91□□□□□ -1.14
Traf1P39428 Gm12540-201ENSMUST00000121938 319 ntBASIC7.91□□□□□ -1.14
Traf1P39428 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC7.91□□□□□ -1.14
Traf1P39428 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC7.91□□□□□ -1.14
Traf1P39428 Gm22311-201ENSMUST00000158006 110 ntBASIC7.91□□□□□ -1.14
Traf1P39428 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Traf1P39428 Mir199b-201ENSMUST00000175066 110 ntBASIC7.91□□□□□ -1.14
Traf1P39428 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Traf1P39428 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC7.91□□□□□ -1.14
Traf1P39428 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC7.91□□□□□ -1.14
Traf1P39428 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC7.91□□□□□ -1.14
Traf1P39428 Gm5717-201ENSMUST00000198243 1062 ntBASIC7.91□□□□□ -1.14
Traf1P39428 Gm7463-201ENSMUST00000201541 547 ntBASIC7.91□□□□□ -1.14
Traf1P39428 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC7.91□□□□□ -1.14
Traf1P39428 Gm9240-201ENSMUST00000206527 742 ntBASIC7.91□□□□□ -1.14
Traf1P39428 Gm44982-201ENSMUST00000208795 471 ntBASIC7.91□□□□□ -1.14
Traf1P39428 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Traf1P39428 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Traf1P39428 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC7.91□□□□□ -1.14
Traf1P39428 Gm46231-201ENSMUST00000220152 314 ntBASIC7.91□□□□□ -1.14
Traf1P39428 Gm7986-201ENSMUST00000221336 551 ntBASIC7.91□□□□□ -1.14
Traf1P39428 Gm6562-201ENSMUST00000221903 464 ntBASIC7.91□□□□□ -1.14
Traf1P39428 AC167013.4-201ENSMUST00000226712 317 ntBASIC7.91□□□□□ -1.14
Traf1P39428 AC174678.3-201ENSMUST00000227568 362 ntBASIC7.91□□□□□ -1.14
Traf1P39428 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Traf1P39428 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Traf1P39428 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Traf1P39428 Gm25587-201ENSMUST00000082498 166 ntBASIC7.91□□□□□ -1.14
Traf1P39428 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Traf1P39428 Gm14976-201ENSMUST00000117055 1394 ntBASIC7.91□□□□□ -1.14
Traf1P39428 Pramel-201ENSMUST00000118979 1383 ntBASIC7.91□□□□□ -1.14
Traf1P39428 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Traf1P39428 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Traf1P39428 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms