Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm43748-201ENSMUST00000202329 1233 ntBASIC6.69□□□□□ -1.34
Lire1P11260 Gm44112-201ENSMUST00000204787 372 ntBASIC6.69□□□□□ -1.34
Lire1P11260 Gm18860-201ENSMUST00000212029 764 ntBASIC6.69□□□□□ -1.34
Lire1P11260 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.69□□□□□ -1.34
Lire1P11260 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC6.69□□□□□ -1.34
Lire1P11260 AC159205.7-201ENSMUST00000225988 692 ntBASIC6.69□□□□□ -1.34
Lire1P11260 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Lire1P11260 Gm15732-201ENSMUST00000079794 480 ntBASIC6.69□□□□□ -1.34
Lire1P11260 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Lire1P11260 Gm43831-201ENSMUST00000200461 2598 ntBASIC6.69□□□□□ -1.34
Lire1P11260 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Lire1P11260 Gm44895-201ENSMUST00000206670 1538 ntBASIC6.69□□□□□ -1.34
Lire1P11260 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
Lire1P11260 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Lire1P11260 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Lire1P11260 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Lire1P11260 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Lire1P11260 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Lire1P11260 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Lire1P11260 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Lire1P11260 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.68□□□□□ -1.34
Lire1P11260 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC6.68□□□□□ -1.34
Lire1P11260 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Lire1P11260 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Lire1P11260 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Lire1P11260 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Lire1P11260 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Lire1P11260 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC6.68□□□□□ -1.34
Lire1P11260 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
Lire1P11260 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Lire1P11260 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Lire1P11260 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Lire1P11260 Gm9208-201ENSMUST00000120468 948 ntBASIC6.68□□□□□ -1.34
Lire1P11260 Gm16523-201ENSMUST00000121253 592 ntBASIC6.68□□□□□ -1.34
Lire1P11260 Gm15362-201ENSMUST00000121459 388 ntBASIC6.68□□□□□ -1.34
Lire1P11260 Gm24893-201ENSMUST00000122745 369 ntBASIC6.68□□□□□ -1.34
Lire1P11260 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC6.68□□□□□ -1.34
Lire1P11260 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC6.68□□□□□ -1.34
Lire1P11260 Gm16260-201ENSMUST00000155141 304 ntBASIC6.68□□□□□ -1.34
Lire1P11260 Gm23082-201ENSMUST00000157852 133 ntBASIC6.68□□□□□ -1.34
Lire1P11260 Gm2619-202ENSMUST00000166777 651 ntBASIC6.68□□□□□ -1.34
Lire1P11260 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC6.68□□□□□ -1.34
Lire1P11260 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC6.68□□□□□ -1.34
Lire1P11260 Gm26179-201ENSMUST00000177723 132 ntBASIC6.68□□□□□ -1.34
Lire1P11260 Mir8094-201ENSMUST00000183361 117 ntBASIC6.68□□□□□ -1.34
Lire1P11260 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC6.68□□□□□ -1.34
Lire1P11260 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Lire1P11260 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Lire1P11260 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC6.68□□□□□ -1.34
Lire1P11260 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC6.68□□□□□ -1.34
Lire1P11260 Gm45789-201ENSMUST00000213038 364 ntBASIC6.68□□□□□ -1.34
Lire1P11260 AC163296.1-202ENSMUST00000218395 661 ntBASIC6.68□□□□□ -1.34
Lire1P11260 AC163296.1-201ENSMUST00000220004 1266 ntBASIC6.68□□□□□ -1.34
Lire1P11260 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC6.68□□□□□ -1.34
Lire1P11260 Gm8288-201ENSMUST00000223406 593 ntBASIC6.68□□□□□ -1.34
Lire1P11260 AC164294.1-201ENSMUST00000224682 688 ntBASIC6.68□□□□□ -1.34
Lire1P11260 AC154461.4-201ENSMUST00000224878 468 ntBASIC6.68□□□□□ -1.34
Lire1P11260 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Lire1P11260 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Lire1P11260 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Lire1P11260 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Lire1P11260 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Lire1P11260 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Lire1P11260 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Lire1P11260 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Lire1P11260 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Lire1P11260 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Lire1P11260 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.68□□□□□ -1.34
Lire1P11260 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Lire1P11260 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.68□□□□□ -1.34
Lire1P11260 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Lire1P11260 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Lire1P11260 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Lire1P11260 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.68□□□□□ -1.34
Lire1P11260 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.68□□□□□ -1.34
Lire1P11260 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Lire1P11260 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Lire1P11260 Gm38124-201ENSMUST00000191710 2581 ntBASIC6.67□□□□□ -1.34
Lire1P11260 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Lire1P11260 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Lire1P11260 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Lire1P11260 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Lire1P11260 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Lire1P11260 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Lire1P11260 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Lire1P11260 Gm43023-201ENSMUST00000197583 2106 ntBASIC6.67□□□□□ -1.34
Lire1P11260 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Lire1P11260 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Lire1P11260 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Lire1P11260 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Lire1P11260 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Lire1P11260 Gm26016-201ENSMUST00000104403 129 ntBASIC6.67□□□□□ -1.34
Lire1P11260 Gm13229-201ENSMUST00000118238 340 ntBASIC6.67□□□□□ -1.34
Lire1P11260 Gm13744-201ENSMUST00000118953 850 ntBASIC6.67□□□□□ -1.34
Lire1P11260 Gm7746-201ENSMUST00000120966 503 ntBASIC6.67□□□□□ -1.34
Lire1P11260 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Lire1P11260 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC6.67□□□□□ -1.34
Lire1P11260 Gm23229-201ENSMUST00000157297 105 ntBASIC6.67□□□□□ -1.34
Lire1P11260 Gm23077-201ENSMUST00000157854 116 ntBASIC6.67□□□□□ -1.34
Lire1P11260 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 547.2 ms