Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Gm43113-201ENSMUST00000199713 1754 ntBASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 AC152922.2-201ENSMUST00000213353 3879 ntBASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Gm37423-201ENSMUST00000194246 3342 ntBASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Gm37254-201ENSMUST00000193542 3901 ntBASIC7.3□□□□□ -1.24
Chmp6P0C0A3 AC165080.3-201ENSMUST00000217162 3116 ntBASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Gm25724-201ENSMUST00000104531 117 ntBASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Gm23888-201ENSMUST00000122690 253 ntBASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Gm25556-201ENSMUST00000158077 144 ntBASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Gm28929-201ENSMUST00000185330 1193 ntBASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Gm37383-201ENSMUST00000191750 745 ntBASIC7.29□□□□□ -1.24
Chmp6P0C0A3 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Gm18040-201ENSMUST00000217922 827 ntBASIC7.29□□□□□ -1.24
Chmp6P0C0A3 AC131795.1-201ENSMUST00000219632 426 ntBASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Gm19047-201ENSMUST00000220922 1099 ntBASIC7.29□□□□□ -1.24
Chmp6P0C0A3 AC122459.3-201ENSMUST00000228508 1042 ntBASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 n-R5s97-201ENSMUST00000082585 113 ntBASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Gm8878-201ENSMUST00000173552 1725 ntBASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 AC154406.1-201ENSMUST00000215220 2529 ntBASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Gm43953-201ENSMUST00000203709 2867 ntBASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Chmp6P0C0A3 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Gm38263-201ENSMUST00000195879 3059 ntBASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Gm24473-201ENSMUST00000104483 131 ntBASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Gm12242-201ENSMUST00000118824 738 ntBASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Gm14612-201ENSMUST00000121522 881 ntBASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Gm22604-201ENSMUST00000157604 311 ntBASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Gm24176-201ENSMUST00000158928 121 ntBASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Mir7669-201ENSMUST00000183442 58 ntBASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Gm19480-201ENSMUST00000185547 667 ntBASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Gm29357-201ENSMUST00000186877 698 ntBASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Chmp6P0C0A3 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
Chmp6P0C0A3 AC154640.3-201ENSMUST00000227492 846 ntBASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Gm18359-201ENSMUST00000173024 1459 ntBASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Gm37863-201ENSMUST00000194911 1457 ntBASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Chmp6P0C0A3 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
Chmp6P0C0A3 CT009480.2-201ENSMUST00000225152 3369 ntBASIC7.28□□□□□ -1.24
Chmp6P0C0A3 AC131667.1-201ENSMUST00000214665 2175 ntBASIC7.27□□□□□ -1.24
Chmp6P0C0A3 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.24
Chmp6P0C0A3 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
Chmp6P0C0A3 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
Chmp6P0C0A3 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms